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  4. UNCOVERING REGULATORY MECHANISMS OF LIPID HOMEOSTASIS WITH CHEMICAL BIOLOGY APPROACHES

UNCOVERING REGULATORY MECHANISMS OF LIPID HOMEOSTASIS WITH CHEMICAL BIOLOGY APPROACHES

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File(s)
Huang_cornellgrad_0058F_15394.pdf (4.48 MB)
No Access Until
2028-01-08
Permanent Link(s)
https://doi.org/10.7298/9xk3-qc60
https://hdl.handle.net/1813/121054
Collections
Cornell Theses and Dissertations
Author
Huang, Shiying
Abstract

In less than a decade, CRISPR screening has revolutionized forward genetics and cell and molecular biology. Advances in screening technologies, including sgRNA libraries, Cas9-expressing cell lines, and streamlined sequencing pipelines, have democratized pooled CRISPR screens at genome-wide scale. Initially, many such screens were survival-based, identifying essential genes in physiological or perturbed processes. With the development and application of a host of new chemical biology tools to CRISPR screening, the phenotypic space is no longer limited to live/dead selection or screening for levels of conventional fluorescent protein reporters. Further, the resolution has been increased from cell populations to single cells or even the subcellular level. Here, we highlight recent advances in pooled CRISPR screening, powered by chemical biology, that have expanded phenotypic space, resolution, scope, and scalability to enable biological hypothesis generation and discovery.

Description
135 pages
Date Issued
2025-12
Keywords
chemical biology
•
CRISPR screening
•
lipid metabolism
•
phosphatidic acid
•
phospholipase D
•
PI4P
Committee Chair
Baskin, Jeremy
Committee Member
Lin, Hening
Hu, Fenghua
Degree Discipline
Chemistry and Chemical Biology
Degree Name
Ph. D., Chemistry and Chemical Biology
Degree Level
Doctor of Philosophy
Type
dissertation or thesis

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