Cornell University
Library
Cornell UniversityLibrary

eCommons

Help
Log In(current)
  1. Home
  2. Cornell University Graduate School
  3. Cornell Theses and Dissertations
  4. Automating Molecular Forcefield Development and Improving Parameterization Methods

Automating Molecular Forcefield Development and Improving Parameterization Methods

File(s)
Casee_cornell_0058O_10564.pdf (2.73 MB)
Permanent Link(s)
https://doi.org/10.7298/m85g-dw09
https://hdl.handle.net/1813/67774
Collections
Cornell Theses and Dissertations
Author
Casee, Gregory Michael
Abstract

At the heart of all Molecular Dynamics simulations lies an energy potential that seeks to capture the underlying quantum mechanical interactions between atoms and molecules. However, describing these interactions is difficult, and developing parameters and functional forms for molecular forcefields is a major roadblock for researchers looking to study new systems computationally. We have simplified forcefield parameterization through an iterative optimization approach that automatically generates new training sets, calculates their energies using Density Functional Theory, and fits the results to the desired potential. We also implement a method of joining distinctive forcefields that allows for flexible choices of short- and long-range potentials that efficiently model reactive environments. This method is illustrated by modeling lead-sulfide quantum dots and their passivating ligands. Finally, we propose methods of weighting training set data based on geometry and energy considerations to increase model accuracy during simulations.

Date Issued
2019-08-30
Keywords
Chemical engineering
Committee Chair
Hanrath, Tobias
Committee Member
Stroock, Abraham Duncan
Degree Discipline
Chemical Engineering
Degree Name
M.S., Chemical Engineering
Degree Level
Master of Science
Type
dissertation or thesis

Site Statistics | Help

About eCommons | Policies | Terms of use | Contact Us

copyright © 2002-2026 Cornell University Library | Privacy | Web Accessibility Assistance