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  4. Supplemental Data from "The gating loop controls Pannexin 1 channel opening in living cells"

Supplemental Data from "The gating loop controls Pannexin 1 channel opening in living cells"

File(s)
Ehrlich_GatingLoop_README_2026.txt (9.43 KB)
Ehrlich_Excel_files.zip (479.21 KB)
Ehrlich_Gel_files.zip (2.19 MB)
Ehrlich_PDB_files.zip (4.35 MB)
Movie_gatingloop_morph.mp4 (5.96 MB)
Permanent Link(s)
https://doi.org/10.7298/RT7J-4829
https://hdl.handle.net/1813/124710
Collections
CVM Research
Author
Ehrlich, Jacqueline
Robertson, Janice
Crowther, Katie
Henze, Erik
Kawate, Toshimitsu
Abstract

These files contain data supporting all results in Ehrlich et. al. "The gating loop controls Pannexin 1 channel opening in living cells." In Ehrlich et. al. we found: Pannexin1 (Panx1) is an ATP release channel with diverse roles in immune signaling and neurotransmission. While the irreversible activation of Panx1 during cell death is well characterized, how the channel reversibly opens in living cells has remained unclear. Here, we present cryo‐EM structures of Panx1 in the presence of lysophospholipids, a recently identified reversible endogenous activator. These structures reveal an open conformation distinct from that induced by caspase‐mediated cleavage, in which both the N‐terminal helix and a previously unrecognized structural element, termed the gating loop, undergo coordinated rearrangements. Site‐directed mutagenesis and electrostatic free‐energy calculations indicate that these conformational changes create a pore environment favorable for ion permeation. Notably, gating‐loop movement alone is sufficient to promote channel opening, defining a reversible activation mechanism for Panx1 in living cells.

Description
Please cite as: Ehrlich, J., Robertson, J., Crowther, K., Henze, E., & Kawate, T. (2026). Supplemental Data from "The gating loop controls Pannexin 1 channel opening in living cells" [Dataset]. Cornell University Library eCommons Repository. https://doi.org/10.7298/RT7J-4829
Sponsorship
National Institutes of Health grant R01GM114379
Cornell CVM Graduate Scholarship
Cornell Margaret and Richard Riney Canine Health Center Research Grants Program
Date Issued
2026
Keywords
gating loop
•
lysophospholipids
•
cryo-electron microscopy
•
ATP-release
•
electrostatic energy
Rights
CC0 1.0 Universal
Rights URI
http://creativecommons.org/publicdomain/zero/1.0/
Type
dataset

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