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  4. IDENTIFYING CELL-TYPE SPECIFIC TRANSCRIPTION FACTORS REGULATING PAUSE FORMATION AND/OR PAUSE RELEASE

IDENTIFYING CELL-TYPE SPECIFIC TRANSCRIPTION FACTORS REGULATING PAUSE FORMATION AND/OR PAUSE RELEASE

File(s)
AlZahrani_cornellgrad_0058F_13790.pdf (3.09 MB)
Permanent Link(s)
https://doi.org/10.7298/sw7v-6c83
https://hdl.handle.net/1813/114560
Collections
Cornell Theses and Dissertations
Author
Al Zahrani, Jawaher
Abstract

Gene transcription is vital for cellular homeostasis, development, disease, and stress. It is subject to regulatory control by specific transcription factors that modulate distinct steps of the transcription cycle. Transcription factors that act on distinct steps within the transcription cycle have yet to be fully characterized. Here, we show that K562 factors EGR1, MITF and GATA1 promote Pol II's transition to productive elongation. Our study revealed that perturbation of specific transcription factors (TFs) like TAL1 and ESRRA could result in subtle effects at gene bodies and pause sites. The outcomes of our results are crucial in enhancing our understanding of the mechanisms by which TFs work together to generate diverse transcription patterns during development and in response to various metabolic, hormonal, and environmental signals.

Description
135 pages
Date Issued
2023-08
Committee Chair
Lis, John
Committee Member
Danko, Charles
Pugh, Benjamin
Degree Discipline
Genetics, Genomics and Development
Degree Name
Ph. D., Genetics, Genomics and Development
Degree Level
Doctor of Philosophy
Type
dissertation or thesis
Link(s) to Catalog Record
https://newcatalog.library.cornell.edu/catalog/16219214

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