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  5. Integrating chemical, genetic, and feasibility assessments for anti-tubercular target validation

Integrating chemical, genetic, and feasibility assessments for anti-tubercular target validation

File(s)
41946910.pdf (1.97 MB)
Permanent Link(s)
https://hdl.handle.net/1813/126882
Collections
Department of Microbiology and Immunology
Author
Schnappinger, Dirk
Berthel, Steven J.
Boshoff, Helena I M.
Krieger, Inna V.
Sukheja, Paridhi
Panda, Saswati
Rath, Siddhant
Briggs, Kelsey
Bian, Xuelin
Rasheed, Sari
Cleghorn, Laura A T.
Ghorpade, Sandeep
Lamprecht, Dirk A.
Fotouhi, Nader
Müller, Rolf
Nathan, Carl
Parish, Tanya
Rhee, Kyu
Warner, Peter
McNamara, Case W.
Rock, Jeremy M.
Sacchettini, James C.
Mizrahi, Valerie
Abstract

Despite the approval of two first-in-class anti-tuberculars over the past two decades, the global burden of tuberculosis (TB) remains unacceptably high, in part due to the emergence and spread of drug-resistant strains of Mycobacterium tuberculosis (Mtb). This review summarizes advances and ongoing challenges in anti-TB drug discovery, focusing on identifying and validating novel targets. Highlighted is a framework developed by the TB Drug Accelerator (TBDA) consortium for target validation in Mtb. Two computational platforms, DAIKON and PARSNIP, allow the systematic evaluation of targets across multiple dimensions, including chemical validation, genetic essentiality, vulnerability, and the feasibility to identify drug-like molecules for a target of interest. Case studies of Pks13 and NadE illustrate how these parameters guide target prioritization and risk assessment. By integrating these metrics, the framework enables dynamic, transparent target ranking, supporting development of both pan-TB and treatment-shortening regimens. This paradigm is adaptable to other bacterial pathogens and is designed to improve evidence-based decision-making in antibacterial drug discovery.

Journal / Series
EMBO molecular medicine
Volume & Issue
18(5)
Date Issued
2026-04-07
Publisher
Springer
Keywords
WCM Library Coordinated Deposit
•
Antitubercular Agents/pharmacology/chemistry/isolation & purification
•
Mycobacterium tuberculosis/drug effects/genetics
•
Drug Discovery/methods
•
Humans
•
Tuberculosis/drug therapy/microbiology
•
Antibacterial Drug Development
•
Database
•
Target Assessment
•
Tuberculosis
Related DOI
https://doi.org/10.1038/s44321-026-00415-7
Previously Published as
Schnappinger D, Berthel SJ, Boshoff HIM, Krieger IV, Sukheja P, Panda S, Rath S, Briggs K, Bian X, Rasheed S, Cleghorn LAT, Ghorpade S, Lamprecht DA, Fotouhi N, Müller R, Nathan C, Parish T, Rhee K, Warner P, McNamara CW, Rock JM, Sacchettini JC, Mizrahi V. Integrating chemical, genetic, and feasibility assessments for anti-tubercular target validation. EMBO molecular medicine. 2026;18(5):1495-1507. doi: 10.1038/s44321-026-00415-7. PMID: 41946910.
Rights
Attribution 4.0 International
Rights URI
https://creativecommons.org/licenses/by/4.0/
Type
article

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