Cornell University
Library
Cornell UniversityLibrary

eCommons

Help
Log In(current)
  1. Home
  2. Undergraduate Honors Theses
  3. College of Arts and Sciences Honors Theses
  4. Biological Sciences Honors Theses
  5. A study on the effectiveness of different RNAi expression systems in arresting Drosophila melanogaster embryos during early development

A study on the effectiveness of different RNAi expression systems in arresting Drosophila melanogaster embryos during early development

File(s)
Jin,Bozhou_Honors Thesis.pdf (829.59 KB)
Permanent Link(s)
https://hdl.handle.net/1813/104200
Collections
Biological Sciences Honors Theses
Author
Jin, Bozhou
Abstract

The technique to arrest Drosophila melanogaster embryos at a specific developmental stage is desirable to various applications that require a population with relatively uniform amount of DNA. One example is to measure the allelic frequencies using pooled sequencing (Wei et al. 2017). To achieve this, RNAi constructs activated by Gal4 proteins were used to knock down genes essential to D. melanogaster embryonic development. I tested the arresting efficiencies of six different RNAi constructs. Four of which had an arrest rate greater than 97.3% (trk-pNP, dl-pNP, dl-UASz, tor-UASz; the names are defined in Method section). I also found strong evidence indicating that the Gal4 gene locus was affecting the arrest rate. Several constructs also showed evidence that the age of the female expressing them could be an affecting factor. In spite of this, there was sometimes high variations between results from different replicas of the same RNAi constructs, which could be either due to random environmental factors or polymorphisms within the same fly lines. Further studies would therefore be needed to better address this internal variation, and to generalize the technique for D. melanogaster strains with different genetic backgrounds.

Date Issued
2021-07
Type
dissertation or thesis
Accessibility Feature
readingOrder
Accessibility Hazard
none

Site Statistics | Help

About eCommons | Policies | Terms of use | Contact Us

copyright © 2002-2026 Cornell University Library | Privacy | Web Accessibility Assistance