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  5. Protocol for the quantification of digestive exophagy in cell culture

Protocol for the quantification of digestive exophagy in cell culture

File(s)
41824448.pdf (13.04 MB)
Permanent Link(s)
https://hdl.handle.net/1813/125171
Collections
Department of Biochemistry
Author
Funes, Lucy
Maxfield, Frederick R.
Sole-Domenech, Santiago
Abstract

Microglia use digestive exophagy to partially degrade, extracellularly, Alzheimer's amyloid-beta aggregates that are too large to be phagocytosed. Here, we present a protocol to quantify this mechanism in cell culture. We describe steps for extracting primary microglial cells and preparing amyloid-beta model aggregates. We then detail procedures for measuring lysosomal exocytosis toward, and extracellular degradation of, these deposits using quantitative fluorescence microscopy. We also provide guidance on quantifying the data using digital image analysis. For complete details on the use and execution of this protocol, please refer to Jacquet et al.1.

Journal / Series
STAR protocols
Volume & Issue
7(1)
Date Issued
2026-03-12
Publisher
Cell Press
Keywords
WCM Library Coordinated Deposit
•
Microglia/metabolism/cytology
•
Animals
•
Amyloid beta-Peptides/metabolism
•
Cell Culture Techniques/methods
•
Microscopy, Fluorescence/methods
•
Exocytosis/physiology
•
Phagocytosis/physiology
•
Cells, Cultured
•
Mice
•
Cell biology
•
Cell culture
•
Cell isolation
•
Cell-based assays
•
Microscopy
•
Molecular/chemical probes
•
Neuroscience
Related DOI
https://doi.org/10.1016/j.xpro.2026.104355
Previously Published as
Funes L, Maxfield FR, Sole-Domenech S. Protocol for the quantification of digestive exophagy in cell culture. STAR protocols. 2026;7(1):104355. doi: 10.1016/j.xpro.2026.104355. PMID: 41824448.
Rights
Attribution 4.0 International
Rights URI
https://creativecommons.org/licenses/by/4.0/
Type
article

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