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  4. DIRECT DETECTION OF EXTRACELLAR VESICLE TRANSMEMBRANE PROTEIN – ANTIBODY INTERACTIONS USING SURFACE PLASMON RESONANCE BIOSENSORS

DIRECT DETECTION OF EXTRACELLAR VESICLE TRANSMEMBRANE PROTEIN – ANTIBODY INTERACTIONS USING SURFACE PLASMON RESONANCE BIOSENSORS

File(s)
LopezBaltazar_cornellgrad_0058F_14571.pdf (11.21 MB)
Permanent Link(s)
https://doi.org/10.7298/bssz-8415
https://hdl.handle.net/1813/116519
Collections
Cornell Theses and Dissertations
Author
Lopez Baltazar, Jesus
Abstract

Extracellular vesicles (EVs) are membrane–bound particles released by all cells for intracellular communication, and they carry biomarkers that play important roles in disease progression. Surface plasmon resonance (SPR) is a powerful label–free, real–time optical detection method that has recently emerged for the detection of EVs via interactions of transmembrane proteins (TMPs) with antibodies. Effective development of SPR–based immunoassays is imperative to advance EV–based diagnostic platforms that could be used in clinical settings. In this thesis, we focused on: 1) the development of SPR–based immunoassays for the detection of EVs derived from mouse monocyte cells, 2) the implementation of a dual–antibody surface functionalization strategy to co–capture EVs via tetraspanin markers, and 3) the proteomic engineering of EV samples and their detection via TMPs using SPR biosensors.First, we developed a series of immunoassays for the detection of EVs derived from mouse monocyte cells (RAW 264.7) using surface plasmon resonance (SPR) biosensors. We chemically immobilized antibodies onto mixed self–assembled monolayers of oligo ethylene glycol (OEG) alkane thiolates with carboxylic and hydroxylic terminal groups. The effects of antibody clonality (monoclonal vs. polyclonal) and antibody surface coverage in targeting EVs via CD81 tetraspanins were investigated. We determined binding kinetic parameters, establishing trends from steric hindrance effects and epitope recognition properties of antibodies. Next, we used the optimal surface chemistry conditions to co–target EV tetraspanin markers CD81, CD63, and CD9 using a dual antibody functionalization strategy providing a critical comparison against single antibody EV capture. We used dual–Ab surfaces to co–target tetraspanins on tetraspanin–enriched microdomains (TEMs), and we further investigated EV capture with non–tetraspanin protein partners LFA–1, ICAM–1, and VCAM–1 associated with CD9 and CD81 in TEMs. Finally, we engineered EVs by prompting the expression of cancer–associated HER–2 and PD–L1 TMPs on their surface and show that overexpression of these markers can be assessed using SPR–based immunoassays. Our work addresses key challenges into immunoassay development for EV detection using SPR biosensors that can further advance EV–based diagnostic platforms.

Description
192 pages
Date Issued
2024-08
Keywords
Biosensors
•
Dual-antibody surfaces
•
Extracellular Vesicles
•
Self-assembled Monolayer
•
Surface Plasmon Resonance
•
Tetraspanin-enriched Microdomains
Committee Chair
Yu, Qiuming
Committee Member
Estroff, Lara
Jiang, Shaoyi
Paszek, Matthew
Degree Discipline
Chemical Engineering
Degree Name
Ph. D., Chemical Engineering
Degree Level
Doctor of Philosophy
Type
dissertation or thesis
Link(s) to Catalog Record
https://newcatalog.library.cornell.edu/catalog/16611739

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