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  4. BIOSYNTHESIS AND FUNCTION OF CARDIAC GLYCOSIDES IN THE CRUCIFER GENUS <i>ERYSIMUM</i>

BIOSYNTHESIS AND FUNCTION OF CARDIAC GLYCOSIDES IN THE CRUCIFER GENUS ERYSIMUM

File(s)
Younkin_cornellgrad_0058F_14212.pdf (13.02 MB)
GY_dissertation_supp_tables.xlsx (222.85 KB)
Permanent Link(s)
https://doi.org/10.7298/42t2-w321
https://hdl.handle.net/1813/116043
Collections
Cornell Theses and Dissertations
Author
Younkin, Gordon
Abstract

Erysimum is a diverse genus within the Brassicaceae consisting of several hundred species distributed across the temperate northern hemisphere. Like most members of the mustard family, Erysimum produces evolutionarily ancestral glucosinolates as a defense against herbivores. However, its recent and rapid radiation has been partially attributed to its 'escape from herbivory' via the evolution of a different group toxic compounds called cardiac glycosides or cardenolides. Cardiac glycosides have been used to treat heart conditions for hundreds of years and are on the World Health Organization's list of essential medicines. However, the biosynthetic pathway remains unknown. In Chapter 1 of this dissertation, I provide background information and describe the development of genetic resources for the study of cardiac glycoside biosynthesis in Erysimum cheiranthoides, including an improved genome assembly and a protocol for floral dip stable transformation. In subsequent chapters, I use metabolomic and transcriptomic datasets to identify candidate genes for cardiac glycoside biosynthesis and test candidate gene function using CRISPR/Cas9-mediated gene editing, in vitro assays with purified recombinant proteins, and pathway reassembly in heterologous systems. In total, I identified and characterized seven enzymes that are involved in cardiac glycoside biosynthesis in E. cheiranthoides. In Chapter 2, I describe EcCYP87A126, a cytochrome P450 that initiates cardiac glycoside biosynthesis via sterol side chain cleavage. Chapter 3 explores Ec3βHSD (a hydroxysteroid dehydrogenase), Ec3KSI (a ketosteroid isomerase), EcP5βR2 (a progesterone 5β-reductase), and EcDET2 (a steroid 5α-reductase), which are involved in oxidation and reduction of the steroid core and help to explain variation in cardiac glycoside structure that is observed across the Erysimum genus. Finally, I discuss two 2-oxoglutarate dependent dioxygenases that are required for cardiac glycoside biosynthesis in Chapter 4. Through the identification of these enzymes, I begin to untangle the evolutionary history of cardiac glycoside biosynthesis in the genus, and I use cardiac glycoside-deficient mutant lines to better understand their role in protection against insect herbivores in an already well-defended plant lineage. These results represent a step forward in our understanding of cardiac glycoside biosynthesis and function, with implications for engineering the pathway in heterologous systems.

Description
195 pages
Supplemental file(s) description: Supplemental tables.
Date Issued
2024-05
Keywords
cardenolides
•
cardiac glycosides
•
Erysimum
•
evolution
•
herbivory
•
metabolism
Committee Chair
Jander, Georg
Committee Member
Schroeder, Frank
Moghe, Gaurav
Degree Discipline
Plant Biology
Degree Name
Ph. D., Plant Biology
Degree Level
Doctor of Philosophy
Rights
Attribution-NonCommercial 4.0 International
Rights URI
https://creativecommons.org/licenses/by-nc/4.0/
Type
dissertation or thesis
Link(s) to Catalog Record
https://newcatalog.library.cornell.edu/catalog/16575619

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