Isolate_ID File_Name Species sigB_AT Cluster_Number Month Year Environment Sample_Description Site_ID Sampling_Time Total_Length Total_Contigs N50 Average_Coverage FSL B10-0010 FSL_B10_0010.fasta Listeria monocytogenes 57 None Jul 2021 PE Market coolers BY31 Mid-operation 2888037 60 126604 157.843 FSL B10-0082 FSL_B10_0082.fasta Listeria seeligeri 12 None Aug 2021 PE Drain BY1 Mid-operation 2922915 114 53303 157.827 FSL B10-0083 FSL_B10_0083.fasta Listeria innocua 53 5 Aug 2021 PE Drain BY4 Mid-operation 2809968 23 228037 151.642 FSL B10-0085 FSL_B10_0085.fasta Listeria innocua 53 5 Aug 2021 PE Cooler door threshold BY23 Mid-operation 2770178 36 160084 153.187 FSL B10-0239 FSL_B10_0239.fasta Listeria seeligeri 12 None Oct 2021 PE Cooler door threshold BY23 Mid-operation 2925345 38 157006 131.155 FSL B10-0241 FSL_B10_0241.fasta Listeria monocytogenes 61 2 Oct 2021 PE Cooler door threshold BY23 Mid-operation 2906305 23 197988 140.504 FSL B10-0272 FSL_B10_0272.fasta Listeria innocua 53 5 Nov 2021 PE Drain BY1 Mid-operation 2810102 10 544359 140.367 FSL B10-0290 FSL_B10_0290.fasta Listeria monocytogenes 61 2 Dec 2021 PE Drain BY1 Mid-operation 2907074 27 197936 125.979 FSL B10-0352 FSL_B10_0352.fasta Listeria monocytogenes 61 2 Feb 2022 PE Drain BY1 Pre-operation 2904788 21 244502 122.295 FSL B10-0358 FSL_B10_0358.fasta Listeria monocytogenes 61 2 Feb 2022 PE Drain BY1 Mid-operation 2906851 24 219832 149.349 FSL B10-0360 FSL_B10_0360.fasta Listeria monocytogenes 61 2 Feb 2022 PE Pillar/floor junction BY13 Mid-operation 2949418 25 262801 59.6959 FSL B10-0365 FSL_B10_0365.fasta Listeria monocytogenes 58 1 Feb 2022 FE Bulk tank raw milk NA NA 2917832 8 561746 165.089 FSL B10-0536 FSL_B10_0536.fasta Listeria innocua 37 4 Mar 2022 FE Bulk tank raw milk NA NA 2868445 10 544372 200.817 FSL B10-0537 FSL_B10_0537.fasta Listeria monocytogenes 58 1 Mar 2022 FE Bulk tank raw milk NA NA 2918396 12 441747 254.736 FSL B10-0542 FSL_B10_0542.fasta Listeria monocytogenes 58 1 Mar 2022 FE Bulk tank raw milk NA NA 2917975 34 174977 74.9025 FSL B10-0547 FSL_B10_0547.fasta Listeria monocytogenes 58 1 Mar 2022 FE Bulk tank raw milk NA NA 2919269 21 301342 165.95 FSL B10-0553 FSL_B10_0553.fasta Listeria monocytogenes 58 1 Mar 2022 FE Individual cow raw milk: cow 1 NA NA 2917750 15 387942 156.635 FSL B10-0554 FSL_B10_0554.fasta Listeria innocua 37 4 Mar 2022 FE Milk filter sock NA NA 2867867 15 303743 190.444 FSL B10-0558 FSL_B10_0558.fasta Listeria monocytogenes 58 1 Mar 2022 FE Milk filter sock NA NA 2918651 12 498013 217.612 FSL B10-0559 FSL_B10_0559.fasta Listeria monocytogenes 61 2 Mar 2022 FE Milk filter sock NA NA 2906619 22 244390 206.167 FSL B10-0560 FSL_B10_0560.fasta Listeria monocytogenes 61 2 Mar 2022 FE Milk filter sock NA NA 2906436 35 169118 117.829 FSL B10-0562 FSL_B10_0562.fasta Listeria monocytogenes 58 1 Mar 2022 FE Milk filter sock NA NA 2918149 35 184419 101.385 FSL B10-0564 FSL_B10_0564.fasta Listeria innocua 53 5 Mar 2022 FE Milk filter sock NA NA 2809951 26 291999 124.962 FSL B10-0567 FSL_B10_0567.fasta Listeria innocua 37 4 Mar 2022 FE Milk filter sock NA NA 2868130 16 354695 183.241 FSL B10-0569 FSL_B10_0569.fasta Listeria monocytogenes 61 2 Mar 2022 FE Milk filter sock NA NA 2906074 15 475351 185.305 FSL B10-0570 FSL_B10_0570.fasta Listeria monocytogenes 58 1 Mar 2022 FE Milk filter sock NA NA 2919193 15 366588 229.215 FSL B10-0571 FSL_B10_0571.fasta Listeria innocua 37 4 Mar 2022 FE Milk filter sock NA NA 2867990 22 256971 189.042 FSL B10-0573 FSL_B10_0573.fasta Listeria monocytogenes 58 1 Mar 2022 FE Milk filter sock NA NA 2918764 45 116027 103.913 FSL B10-0675 FSL_B10_0675.fasta Listeria seeligeri 12 None Apr 2022 FE Composite A individual cow raw milk NA NA 2913611 77 75530 91.6849 FSL B10-0677 FSL_B10_0677.fasta Listeria monocytogenes 61 2 Apr 2022 FE Composite A individual cow raw milk NA NA 2905412 36 152246 128.747 FSL B10-0681 FSL_B10_0681.fasta Listeria innocua 37 4 Apr 2022 FE Composite B individual cow raw milk NA NA 2868881 18 291284 194.23 FSL B10-0690 FSL_B10_0690.fasta Listeria innocua 37 4 Apr 2022 FE Composite D individual cow raw milk NA NA 2907712 16 288761 147.131 FSL B10-0691 FSL_B10_0691.fasta Listeria innocua 53 5 Apr 2022 FE Composite E individual cow raw milk NA NA 2809238 13 370947 172.324 FSL B10-0692 FSL_B10_0692.fasta Listeria innocua 37 4 Apr 2022 FE Composite E individual cow raw milk NA NA 2868012 16 256954 173.989 FSL B10-0703 FSL_B10_0703.fasta Listeria innocua 37 4 Apr 2022 FE Composite H individual cow raw milk NA NA 2906594 26 242528 187.307 FSL B10-0706 FSL_B10_0706.fasta Listeria innocua 37 4 Apr 2022 FE Composite K individual cow raw milk NA NA 2866480 64 86726 85.5342 FSL B10-0710 FSL_B10_0710.fasta Listeria monocytogenes 58 1 Apr 2022 FE Composite L individual cow raw milk NA NA 2919226 34 211475 97.7152 FSL B10-0713 FSL_B10_0713.fasta Listeria welshimeri 27 None Apr 2022 FE Composite M individual cow raw milk NA NA 2853389 18 603699 180.642 FSL B10-0717 FSL_B10_0717.fasta Listeria monocytogenes 58 1 Apr 2022 FE Bulk tank raw milk NA NA 2918077 22 260350 182.698 FSL B10-0723 FSL_B10_0723.fasta Listeria innocua 37 4 Apr 2022 FE Milk filter sock NA NA 2868646 14 497327 195.905 FSL B10-0725 FSL_B10_0725.fasta Listeria monocytogenes 58 1 Apr 2022 FE Milk filter sock NA NA 2919003 15 377238 224.193 FSL B10-0726 FSL_B10_0726.fasta Listeria monocytogenes 61 2 Apr 2022 FE Milk filter sock NA NA 2905133 40 127343 115.45 FSL B10-0728 FSL_B10_0728.fasta Listeria innocua 37 4 Apr 2022 FE Individual cow raw milk: cow L-4 NA NA 2867903 9 1453907 159.193 FSL B10-0729 FSL_B10_0729.fasta Listeria monocytogenes 57 None Apr 2022 FE Individual cow raw milk: cow L-4 NA NA 2919630 53 149844 100.668 FSL B10-0735 FSL_B10_0735.fasta Listeria monocytogenes 58 1 Apr 2022 FE Individual cow raw milk: cow L-3 NA NA 2918985 29 178629 144.499 FSL B10-0737 FSL_B10_0737.fasta Listeria monocytogenes 58 None Apr 2022 FE Individual cow raw milk: cow L-5 NA NA 2966800 39 206353 111.617 FSL B10-0744 FSL_B10_0744.fasta Listeria innocua 37 4 Apr 2022 FE Individual cow raw milk: cow A-4 NA NA 2868559 19 254790 155.238 FSL L8-1105 FSL_L8_1105.fasta Listeria welshimeri 47 6 Apr 2021 PE Floor under sink BY19 Mid-operation 2941915 51 122925 103.977 FSL L8-1108 FSL_L8_1108.fasta Listeria welshimeri 47 6 Apr 2021 PE Table legs BY14 Mid-operation 3001480 46 122396 200.383 FSL L8-1110 FSL_L8_1110.fasta Listeria monocytogenes 57 None Apr 2021 PE Drain BY4 Mid-operation 2883994 13 522911 206.21 FSL L8-1112 FSL_L8_1112.fasta Listeria innocua 31 3 Apr 2021 PE Drain BY4 Mid-operation 2817099 11 1475754 180.487 FSL L8-1113 FSL_L8_1113.fasta Listeria monocytogenes 61 2 Apr 2021 PE Drain BY4 Mid-operation 2906258 14 476492 171.786 FSL L8-1115 FSL_L8_1115.fasta Listeria innocua 53 5 Apr 2021 PE Drain BY4 Mid-operation 2810130 8 1413390 171.429 FSL L8-1120 FSL_L8_1120.fasta Listeria monocytogenes 61 None May 2021 PE Drain BY4 Mid-operation 2870569 20 238219 51.4844 FSL L8-1156 FSL_L8_1156.fasta Listeria innocua 53 5 May 2021 PE Pillar/floor junction BY13 Mid-operation 2809652 10 517081 130.28 FSL L8-1157 FSL_L8_1157.fasta Listeria welshimeri 27 None May 2021 PE Drain BY4 Mid-operation 2849345 23 317073 207.793 FSL L8-1158 FSL_L8_1158.fasta Listeria innocua 31 3 May 2021 PE Drain BY4 Mid-operation 2817557 11 477508 125.175 FSL L8-1173 FSL_L8_1173.fasta Listeria innocua 37 4 May 2021 PE Cooler door threshold BY23 Mid-operation 2868449 16 267702 118.103 FSL R12-1571 FSL_R12_1571.fasta Listeria monocytogenes 61 None Jan 2021 PE Drain BY2 Pre-operation 2892914 12 557139 97.4518 FSL R12-1572 FSL_R12_1572.fasta Listeria innocua 31 3 Jan 2021 PE Drain BY2 Pre-operation 2819671 12 1475123 110.355 FSL R12-1577 FSL_R12_1577.fasta Listeria innocua 53 5 Jan 2021 PE Floor mat BY3 Pre-operation 2771866 9 1413494 127.936 FSL R12-1578 FSL_R12_1578.fasta Listeria welshimeri 47 6 Jan 2021 PE Squeegee BY12 Pre-operation 2943702 47 170013 101.846 FSL R12-1579 FSL_R12_1579.fasta Listeria innocua 37 4 Jan 2021 PE Squeegee BY12 Pre-operation 2867516 9 1453903 174.286 FSL R12-1581 FSL_R12_1581.fasta Listeria monocytogenes 61 2 Jan 2021 PE Cart wheels BY15 Pre-operation 2908315 11 556931 91.7431 FSL R12-1582 FSL_R12_1582.fasta Listeria innocua 37 4 Jan 2021 PE Cart surface BY16 Pre-operation 2867607 10 1453907 153.85 FSL R12-1587 FSL_R12_1587.fasta Listeria monocytogenes 61 2 Jan 2021 PE Hose BY17 Pre-operation 2906203 14 516412 147.798 FSL R12-1588 FSL_R12_1588.fasta Listeria monocytogenes 57 None Jan 2021 PE Rack BY8 Pre-operation 2868066 14 499352 148.067 FSL R12-1592 FSL_R12_1592.fasta Listeria monocytogenes 61 2 Jan 2021 PE Drain BY5 Pre-operation 2906083 21 354612 187.476 FSL R12-1594 FSL_R12_1594.fasta Listeria innocua 31 3 Jan 2021 PE Drain BY4 Pre-operation 2818165 10 1475757 246.912 FSL R12-1598 FSL_R12_1598.fasta Listeria monocytogenes 61 2 Jan 2021 PE Drain BY4 Pre-operation 2909321 10 1497255 95.608