Assay_Type_s AssemblyName_s AvgSpotLen_l BioProject_s BioSample_s Center_Name_s Experiment_s Instrument_s LibraryLayout_s LibrarySelection_s LibrarySource_s Library_Name_s LoadDate_s MBases_l MBytes_l Organism_s Platform_s ReleaseDate_s Run_s SRA_Sample_s SRA_Study_s Sample_Name_s age_s ecotype_s genotype_s genotype_variation_s source_name_s tissue_s Consent_s InsertSize_l miRNA-Seq 69 PRJDB2183 SAMD00009114 Takara Bio DRX012741 Illumina Genome Analyzer IIx SINGLE other TRANSCRIPTOMIC Col-TGBp1 2014-07-25 390 238 Arabidopsis thaliana ILLUMINA 2014-07-25 DRR014210 DRS012541 DRP001245 SAMD00009114 public 0 miRNA-Seq 69 PRJDB2183 SAMD00009113 Takara Bio DRX012742 Illumina Genome Analyzer IIx SINGLE other TRANSCRIPTOMIC Col-TGBp1 2014-07-25 280 172 Arabidopsis thaliana ILLUMINA 2014-07-25 DRR014211 DRS012542 DRP001245 SAMD00009113 public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882440 Kyuha Choi ERX1368635 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 1 2016-06-02 392 147 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297303 ERS1069574 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 1 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882441 Kyuha Choi ERX1368636 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 10 2016-06-02 321 124 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297304 ERS1069575 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 10 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882442 Kyuha Choi ERX1368637 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 11 2016-06-02 334 128 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297305 ERS1069576 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 11 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882443 Kyuha Choi ERX1368638 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 12 2016-06-02 333 127 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297306 ERS1069577 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 12 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882444 Kyuha Choi ERX1368639 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 13 2016-06-02 384 144 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297307 ERS1069578 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 13 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882445 Kyuha Choi ERX1368640 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 14 2016-06-02 371 141 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297308 ERS1069579 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 14 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882446 Kyuha Choi ERX1368641 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 15 2016-06-02 386 145 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297309 ERS1069580 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 15 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882447 Kyuha Choi ERX1368642 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 16 2016-06-02 383 143 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297310 ERS1069581 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 16 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882448 Kyuha Choi ERX1368643 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 17 2016-06-02 426 158 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297311 ERS1069582 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 17 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882449 Kyuha Choi ERX1368644 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 18 2016-06-02 410 154 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297312 ERS1069583 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 18 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882450 Kyuha Choi ERX1368645 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 19 2016-06-02 428 160 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297313 ERS1069584 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 19 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882451 Kyuha Choi ERX1368646 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 2 2016-06-02 376 143 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297314 ERS1069585 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 2 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882452 Kyuha Choi ERX1368647 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 20 2016-06-02 422 157 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297315 ERS1069586 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 20 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882453 Kyuha Choi ERX1368648 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 21 2016-06-02 399 150 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297316 ERS1069587 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 21 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882454 Kyuha Choi ERX1368649 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 22 2016-06-02 385 146 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297317 ERS1069588 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 22 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882455 Kyuha Choi ERX1368650 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 23 2016-06-02 402 152 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297318 ERS1069589 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 23 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882456 Kyuha Choi ERX1368651 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 24 2016-06-02 399 149 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297319 ERS1069590 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 24 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882457 Kyuha Choi ERX1368652 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 25 2016-06-02 350 131 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297320 ERS1069591 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 25 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882458 Kyuha Choi ERX1368653 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 26 2016-06-02 337 128 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297321 ERS1069592 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 26 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882459 Kyuha Choi ERX1368654 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 27 2016-06-02 351 132 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297322 ERS1069593 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 27 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882460 Kyuha Choi ERX1368655 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 28 2016-06-02 349 130 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297323 ERS1069594 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 28 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882461 Kyuha Choi ERX1368656 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 29 2016-06-02 446 166 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297324 ERS1069595 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 29 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882462 Kyuha Choi ERX1368657 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 3 2016-06-02 394 148 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297325 ERS1069596 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 3 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882463 Kyuha Choi ERX1368658 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 30 2016-06-02 431 163 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297326 ERS1069597 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 30 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882464 Kyuha Choi ERX1368659 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 31 2016-06-02 448 168 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297327 ERS1069598 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 31 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882465 Kyuha Choi ERX1368660 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 32 2016-06-02 446 166 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297328 ERS1069599 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 32 7 Col-0 arp6 knock out public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882466 Kyuha Choi ERX1368661 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 4 2016-06-02 388 146 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297329 ERS1069600 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 4 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882467 Kyuha Choi ERX1368662 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 5 2016-06-02 395 147 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297330 ERS1069601 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 5 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882468 Kyuha Choi ERX1368663 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 6 2016-06-02 380 144 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297331 ERS1069602 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 6 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882469 Kyuha Choi ERX1368664 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 7 2016-06-02 397 149 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297332 ERS1069603 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 7 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882470 Kyuha Choi ERX1368665 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 8 2016-06-02 394 147 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297333 ERS1069604 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 8 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB12881 SAMEA3882471 Kyuha Choi ERX1368666 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC Athaliana_srna_choi_2016 9 2016-06-03 334 127 Arabidopsis thaliana ILLUMINA 2016-06-01 ERR1297334 ERS1069605 ERP014406 E-MTAB-4498:Athaliana_srna_choi_2016 9 7 Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB13163 SAMEA3907512 EMBL RNAseq facility ERX1409506 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 1 2016-09-29 592 401 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337924 ERS1094646 ERP014703 SAMEA3907512 ago1-3 FLAG-AGO1WT public 0 miRNA-Seq 51 PRJEB13163 SAMEA3907513 EMBL RNAseq facility ERX1409507 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 10 2016-09-29 726 498 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337925 ERS1094647 ERP014703 SAMEA3907513 ago1-3 FLAG-AGO1E803A public 0 miRNA-Seq 51 PRJEB13163 SAMEA3907514 EMBL RNAseq facility ERX1409508 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 11 2016-09-29 604 411 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337926 ERS1094648 ERP014703 SAMEA3907514 ago1-3 FLAG-AGO1H988F public 0 miRNA-Seq 51 PRJEB13163 SAMEA3907515 EMBL RNAseq facility ERX1409509 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 12 2016-09-29 1222 822 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337927 ERS1094649 ERP014703 SAMEA3907515 ago1-3 FLAG-AGO1H988F public 0 miRNA-Seq 50 PRJEB13163 SAMEA3907516 Aros AB ERX1409510 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 13 2016-09-29 602 292 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337928 ERS1094650 ERP014703 SAMEA3907516 ago1-3 FLAG-AGO1WT public 0 miRNA-Seq 50 PRJEB13163 SAMEA3907517 Aros AB ERX1409511 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 14 2016-09-29 610 297 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337929 ERS1094651 ERP014703 SAMEA3907517 ago1-3 FLAG-AGO1WT public 0 miRNA-Seq 50 PRJEB13163 SAMEA3907518 Aros AB ERX1409512 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 15 2016-09-29 482 233 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337930 ERS1094652 ERP014703 SAMEA3907518 ago1-3/+ FLAG-AGO1D762A public 0 miRNA-Seq 50 PRJEB13163 SAMEA3907519 Aros AB ERX1409513 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 16 2016-09-29 477 231 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337931 ERS1094653 ERP014703 SAMEA3907519 ago1-3/+ FLAG-AGO1D762A public 0 miRNA-Seq 50 PRJEB13163 SAMEA3907520 Aros AB ERX1409514 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 17 2016-09-29 514 253 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337932 ERS1094654 ERP014703 SAMEA3907520 ago1-3 FLAG-AGO1WT public 0 miRNA-Seq 50 PRJEB13163 SAMEA3907521 Aros AB ERX1409515 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 18 2016-09-29 623 308 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337933 ERS1094655 ERP014703 SAMEA3907521 ago1-3 FLAG-AGO1WT public 0 miRNA-Seq 50 PRJEB13163 SAMEA3907522 Aros AB ERX1409516 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 19 2016-09-29 728 365 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337934 ERS1094656 ERP014703 SAMEA3907522 ago1-3 FLAG-AGO1(D762A) public 0 miRNA-Seq 51 PRJEB13163 SAMEA3907523 EMBL RNAseq facility ERX1409517 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 2 2016-09-29 841 569 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337935 ERS1094657 ERP014703 SAMEA3907523 ago1-3 FLAG-AGO1WT public 0 miRNA-Seq 50 PRJEB13163 SAMEA3907524 Aros AB ERX1409518 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 20 2016-09-29 612 307 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337936 ERS1094658 ERP014703 SAMEA3907524 ago1-3 FLAG-AGO1(D762A) public 0 miRNA-Seq 50 PRJEB13163 SAMEA3907525 Aros AB ERX1409519 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 21 2016-09-29 384 191 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337937 ERS1094659 ERP014703 SAMEA3907525 sgs3-1/ago1-3 FLAG-AGO1(D762A) public 0 miRNA-Seq 50 PRJEB13163 SAMEA3907526 Aros AB ERX1409520 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 22 2016-09-29 510 252 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337938 ERS1094660 ERP014703 SAMEA3907526 sgs3-1/ago1-3 FLAG-AGO1(D762A) public 0 miRNA-Seq 50 PRJEB13163 SAMEA3907527 Aros AB ERX1409521 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 23 2016-09-29 586 289 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337939 ERS1094661 ERP014703 SAMEA3907527 rdr6-12/ago1-3 FLAG-AGO1(D762A) public 0 miRNA-Seq 50 PRJEB13163 SAMEA3907528 Aros AB ERX1409522 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 24 2016-09-29 571 282 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337940 ERS1094662 ERP014703 SAMEA3907528 rdr6-12/ago1-3 FLAG-AGO1(D762A) public 0 miRNA-Seq 51 PRJEB13163 SAMEA3907534 EMBL RNAseq facility ERX1409528 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 3 2016-09-29 645 435 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337946 ERS1094668 ERP014703 SAMEA3907534 ago1-3 FLAG-AGO1WT public 0 miRNA-Seq 51 PRJEB13163 SAMEA3907545 EMBL RNAseq facility ERX1409539 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 4 2016-09-29 865 579 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337957 ERS1094679 ERP014703 SAMEA3907545 ago1-3 FLAG-AGO1WT public 0 miRNA-Seq 51 PRJEB13163 SAMEA3907555 EMBL RNAseq facility ERX1409549 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 5 2016-09-29 598 409 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337967 ERS1094689 ERP014703 SAMEA3907555 ago1-3 public 0 miRNA-Seq 51 PRJEB13163 SAMEA3907556 EMBL RNAseq facility ERX1409550 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 6 2016-09-29 839 571 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337968 ERS1094690 ERP014703 SAMEA3907556 ago1-3 public 0 miRNA-Seq 51 PRJEB13163 SAMEA3907557 EMBL RNAseq facility ERX1409551 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 7 2016-09-29 684 466 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337969 ERS1094691 ERP014703 SAMEA3907557 ago1-3 FLAG-AGO1D762A public 0 miRNA-Seq 51 PRJEB13163 SAMEA3907558 EMBL RNAseq facility ERX1409552 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 8 2016-09-29 705 479 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337970 ERS1094692 ERP014703 SAMEA3907558 ago1-3 FLAG-AGO1D762A public 0 miRNA-Seq 51 PRJEB13163 SAMEA3907559 EMBL RNAseq facility ERX1409553 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Sample 9 2016-09-29 625 423 Arabidopsis thaliana ILLUMINA 2016-09-28 ERR1337971 ERS1094693 ERP014703 SAMEA3907559 ago1-3 FLAG-AGO1E803A public 0 ncRNA-Seq 50 PRJEB15202 SAMEA4392502 CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE ERX1664262 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC unspecified 2017-02-24 1269 456 Arabidopsis thaliana ILLUMINA 2017-02-22 ERR1593764 ERS1303951 ERP016909 mail1_sRNAseq public 0 ncRNA-Seq 50 PRJEB15202 SAMEA4392515 CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE ERX1664261 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC unspecified 2017-02-24 1203 430 Arabidopsis thaliana ILLUMINA 2017-02-22 ERR1593763 ERS1303964 ERP016909 WT_sRNAseq public 0 OTHER 40 PRJEB3161 SAMEA1470024 MPI-TUEBINGEN ERX135561 Illumina Genome Analyzer II SINGLE unspecified OTHER unspecified 2013-06-13 1028 633 Arabidopsis thaliana ILLUMINA 2012-08-28 ERR159617 ERS157191 ERP001622 Col-0_2 public 0 OTHER 40 PRJEB3161 SAMEA1470020 MPI-TUEBINGEN ERX135562 Illumina Genome Analyzer II SINGLE unspecified OTHER unspecified 2013-06-13 855 623 Arabidopsis thaliana ILLUMINA 2012-08-28 ERR159618 ERS157192 ERP001622 cpl1-7_1 public 0 OTHER 40 PRJEB3161 SAMEA1470022 MPI-TUEBINGEN ERX135563 Illumina Genome Analyzer II SINGLE unspecified OTHER unspecified 2013-06-13 1183 759 Arabidopsis thaliana ILLUMINA 2012-08-28 ERR159619 ERS157193 ERP001622 cpl1-7_2 public 0 OTHER 40 PRJEB3161 SAMEA1470021 MPI-TUEBINGEN ERX135564 Illumina Genome Analyzer II SINGLE unspecified OTHER unspecified 2013-06-13 1165 761 Arabidopsis thaliana ILLUMINA 2012-08-28 ERR159620 ERS157194 ERP001622 hyl1-2_1 public 0 OTHER 40 PRJEB3161 SAMEA1470025 MPI-TUEBINGEN ERX135565 Illumina Genome Analyzer II SINGLE unspecified OTHER unspecified 2013-06-13 1026 633 Arabidopsis thaliana ILLUMINA 2012-08-28 ERR159621 ERS157195 ERP001622 hyl1-2_2 public 0 OTHER 40 PRJEB3161 SAMEA1470023 MPI-TUEBINGEN ERX135566 Illumina Genome Analyzer II SINGLE unspecified OTHER unspecified 2013-06-13 1039 658 Arabidopsis thaliana ILLUMINA 2012-08-28 ERR159622 ERS157196 ERP001622 se_3 public 0 miRNA-Seq 36 PRJEB6716 ERS505776 Beijing Genome Institute ERX521756 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Athaliana1_FDFSS 2015-05-22 254 298 Arabidopsis thaliana ILLUMINA 2015-05-22 ERR562745 ERS505776 ERP006353 E-MTAB-2733:Athaliana1_FDFSS 6 weeks wild type genotype public 0 miRNA-Seq 36 PRJEB6716 ERS505777 Beijing Genome Institute ERX521757 Illumina HiSeq 2000 SINGLE other TRANSCRIPTOMIC Athaliana2_NSS 2015-05-22 87 103 Arabidopsis thaliana ILLUMINA 2015-05-22 ERR562741 ERS505777 ERP006353 E-MTAB-2733:Athaliana2_NSS 6 weeks wild type genotype public 0 miRNA-Seq 36 PRJEB6716 ERS505788 Beijing Genome Institute ERX521768 Illumina HiSeq 2000 SINGLE other TRANSCRIPTOMIC Athaliana1_NSS 2015-05-22 157 189 Arabidopsis thaliana ILLUMINA 2015-05-22 ERR562732 ERS505788 ERP006353 E-MTAB-2733:Athaliana1_NSS 6 weeks wild type genotype public 0 miRNA-Seq 36 PRJEB6716 ERS505792 Beijing Genome Institute ERX521772 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Athaliana2_FDFSS 2015-05-22 229 266 Arabidopsis thaliana ILLUMINA 2015-05-22 ERR562746 ERS505792 ERP006353 E-MTAB-2733:Athaliana2_FDFSS 6 weeks wild type genotype public 0 miRNA-Seq 51 PRJEB7523 SAMEA2820934 Donna Bond ERX611291 NextSeq 500 SINGLE RT-PCR TRANSCRIPTOMIC wild type #3 2014-12-02 1005 486 Arabidopsis thaliana ILLUMINA 2014-11-29 ERR654975 ERS568288 ERP007264 E-MTAB-3009:wild type #3 5 weeks post germination; 2 weeks post infection Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB7523 SAMEA2820935 Donna Bond ERX611292 NextSeq 500 SINGLE RT-PCR TRANSCRIPTOMIC dcl2/4 #3 2014-12-12 197 96 Arabidopsis thaliana ILLUMINA 2014-11-29 ERR654973 ERS568289 ERP007264 E-MTAB-3009:dcl2/4 #3 5 weeks post germination; 2 weeks post infection Col-0 dcl2-1/dcl4-2 public 0 miRNA-Seq 51 PRJEB7523 SAMEA2820936 Donna Bond ERX611293 NextSeq 500 SINGLE RT-PCR TRANSCRIPTOMIC dcl2/4 #1 2014-12-02 1024 503 Arabidopsis thaliana ILLUMINA 2014-11-29 ERR654971 ERS568290 ERP007264 E-MTAB-3009:dcl2/4 #1 5 weeks post germination; 2 weeks post infection Col-0 dcl2-1/dcl4-2 public 0 miRNA-Seq 51 PRJEB7523 SAMEA2820937 Donna Bond ERX611294 NextSeq 500 SINGLE RT-PCR TRANSCRIPTOMIC dcl2/4 #2 2014-12-02 1124 544 Arabidopsis thaliana ILLUMINA 2014-11-29 ERR654968 ERS568291 ERP007264 E-MTAB-3009:dcl2/4 #2 5 weeks post germination; 2 weeks post infection Col-0 dcl2-1/dcl4-2 public 0 miRNA-Seq 51 PRJEB7523 SAMEA2820938 Donna Bond ERX611295 NextSeq 500 SINGLE RT-PCR TRANSCRIPTOMIC wild type #2 2014-12-02 812 396 Arabidopsis thaliana ILLUMINA 2014-11-29 ERR654970 ERS568292 ERP007264 E-MTAB-3009:wild type #2 5 weeks post germination; 2 weeks post infection Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB7523 SAMEA2820939 Donna Bond ERX611296 NextSeq 500 SINGLE RT-PCR TRANSCRIPTOMIC wild type #1 2014-12-03 933 450 Arabidopsis thaliana ILLUMINA 2014-11-29 ERR654969 ERS568293 ERP007264 E-MTAB-3009:wild type #1 5 weeks post germination; 2 weeks post infection Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB7523 SAMEA2820940 Donna Bond ERX611297 NextSeq 500 SINGLE RT-PCR TRANSCRIPTOMIC wild type #4 2014-12-12 885 431 Arabidopsis thaliana ILLUMINA 2014-11-29 ERR654972 ERS568294 ERP007264 E-MTAB-3009:wild type #4 5 weeks post germination; 2 weeks post infection Col-0 wild type genotype public 0 miRNA-Seq 51 PRJEB7523 SAMEA2820941 Donna Bond ERX611298 NextSeq 500 SINGLE RT-PCR TRANSCRIPTOMIC dcl2/4 #4 2014-12-04 1013 493 Arabidopsis thaliana ILLUMINA 2014-11-29 ERR654974 ERS568295 ERP007264 E-MTAB-3009:dcl2/4 #4 5 weeks post germination; 2 weeks post infection Col-0 dcl2-1/dcl4-2 public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483251 arosab.com ERX1035669 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Col-0 rep1 microsome 2016-08-01 411 197 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958562 ERS790681 ERP011009 E-MTAB-3736:Col-0 rep1 microsome wild type genotype public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483252 arosab.com ERX1035670 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Col-0 rep2 microsome 2016-08-01 301 150 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958563 ERS790682 ERP011009 E-MTAB-3736:Col-0 rep2 microsome wild type genotype public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483253 arosab.com ERX1035671 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC era1-2 rep1 microsome 2016-08-01 453 224 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958564 ERS790683 ERP011009 E-MTAB-3736:era1-2 rep1 microsome farnasyltransferase beta deletion public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483254 arosab.com ERX1035672 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC era1-2 rep2 microsome 2016-08-01 372 184 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958565 ERS790684 ERP011009 E-MTAB-3736:era1-2 rep2 microsome farnasyltransferase beta deletion public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483255 arosab.com ERX1035673 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC J3C417S rep1 microsome 2016-08-01 310 156 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958566 ERS790685 ERP011009 E-MTAB-3736:J3C417S rep1 microsome J2/J3 deletion, with transgenic J3C417S public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483256 arosab.com ERX1035674 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC J3C417S rep2 microsome 2016-08-01 269 135 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958567 ERS790686 ERP011009 E-MTAB-3736:J3C417S rep2 microsome J2/J3 deletion, with transgenic J3C417S public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483257 arosab.com ERX1035675 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC J3wt rep1 microsome 2016-08-01 249 123 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958568 ERS790687 ERP011009 E-MTAB-3736:J3wt rep1 microsome J2/J3 deletion, with transgenic wt J3 public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483258 arosab.com ERX1035676 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC J3wt rep2 microsome 2016-08-01 252 126 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958569 ERS790688 ERP011009 E-MTAB-3736:J3wt rep2 microsome J2/J3 deletion, with transgenic wt J3 public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483259 arosab.com ERX1035677 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Col-0 rep1 total 2016-08-01 266 130 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958570 ERS790689 ERP011009 E-MTAB-3736:Col-0 rep1 total wild type genotype public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483260 arosab.com ERX1035678 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Col-0 rep2 total 2016-08-01 57 28 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958571 ERS790690 ERP011009 E-MTAB-3736:Col-0 rep2 total wild type genotype public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483261 arosab.com ERX1035679 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC era1-2 rep1 total 2016-08-01 298 146 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958572 ERS790691 ERP011009 E-MTAB-3736:era1-2 rep1 total farnasyltransferase beta deletion public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483262 arosab.com ERX1035680 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC era1-2 rep2 total 2016-08-01 323 159 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958573 ERS790692 ERP011009 E-MTAB-3736:era1-2 rep2 total farnasyltransferase beta deletion public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483263 arosab.com ERX1035681 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC J3C417S rep1 total 2016-08-01 351 171 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958574 ERS790693 ERP011009 E-MTAB-3736:J3C417S rep1 total J2/J3 deletion, with transgenic J3C417S public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483264 arosab.com ERX1035682 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC J3C417S rep2 total 2016-08-01 400 196 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958575 ERS790694 ERP011009 E-MTAB-3736:J3C417S rep2 total J2/J3 deletion, with transgenic J3C417S public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483265 arosab.com ERX1035683 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC J3wt rep1 total 2016-08-01 294 144 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958576 ERS790695 ERP011009 E-MTAB-3736:J3wt rep1 total J2/J3 deletion, with transgenic wt J3 public 0 miRNA-Seq 50 PRJEB9861 SAMEA3483266 arosab.com ERX1035684 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC J3wt rep2 total 2016-08-01 377 183 Arabidopsis thaliana ILLUMINA 2016-08-01 ERR958577 ERS790696 ERP011009 E-MTAB-3736:J3wt rep2 total J2/J3 deletion, with transgenic wt J3 public 0 ncRNA-Seq 22 PRJEB9919 SAMEA3487647 CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE ERX1043115 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC unspecified 2015-07-25 923 454 Arabidopsis thaliana ILLUMINA 2015-07-23 ERR966148 ERS794796 ERP011070 Col-0_sRNAseq public 0 ncRNA-Seq 21 PRJEB9919 SAMEA3487648 CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE ERX1043116 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC unspecified 2015-07-25 970 482 Arabidopsis thaliana ILLUMINA 2015-07-23 ERR966149 ERS794797 ERP011070 met1-3_sRNAseq public 0 ncRNA-Seq 21 PRJEB9919 SAMEA3487649 CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE ERX1043117 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC unspecified 2015-07-25 1383 681 Arabidopsis thaliana ILLUMINA 2015-07-23 ERR966150 ERS794798 ERP011070 Col-0xmet1-3_sRNAseq public 0 ncRNA-Seq 22 PRJEB9919 SAMEA3487650 CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE ERX1043118 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC unspecified 2015-07-25 1837 903 Arabidopsis thaliana ILLUMINA 2015-07-23 ERR966151 ERS794799 ERP011070 met1-3xCol-0_sRNAseq public 0 miRNA-Seq 50 PRJEB10023 SAMEA3493423 arosab.com ERX1050004 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC SKI2/rdr6 rep1 2015-10-21 236 116 Arabidopsis thaliana ILLUMINA 2015-10-21 ERR973023 ERS800572 ERP011201 E-MTAB-3781:SKI2/rdr6 rep1 RDR6 mutant public 0 miRNA-Seq 50 PRJEB10023 SAMEA3493424 arosab.com ERX1050005 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC SKI2/rdr6 rep2 2015-10-21 288 142 Arabidopsis thaliana ILLUMINA 2015-10-21 ERR973024 ERS800573 ERP011201 E-MTAB-3781:SKI2/rdr6 rep2 RDR6 mutant public 0 miRNA-Seq 50 PRJEB10023 SAMEA3493425 arosab.com ERX1050006 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC ski2-4/RDR6 rep1 2015-10-21 270 133 Arabidopsis thaliana ILLUMINA 2015-10-21 ERR973025 ERS800574 ERP011201 E-MTAB-3781:ski2-4/RDR6 rep1 SKI2 mutant public 0 miRNA-Seq 50 PRJEB10023 SAMEA3493426 arosab.com ERX1050007 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC ski2-4/RDR6 rep2 2015-10-21 273 137 Arabidopsis thaliana ILLUMINA 2015-10-21 ERR973026 ERS800575 ERP011201 E-MTAB-3781:ski2-4/RDR6 rep2 SKI2 mutant public 0 miRNA-Seq 50 PRJEB10023 SAMEA3493427 arosab.com ERX1050008 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC ski2-4/rdr6 rep1 2015-10-21 218 107 Arabidopsis thaliana ILLUMINA 2015-10-21 ERR973027 ERS800576 ERP011201 E-MTAB-3781:ski2-4/rdr6 rep1 SKI2 mutant and RDR6 mutant public 0 miRNA-Seq 50 PRJEB10023 SAMEA3493428 arosab.com ERX1050009 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC ski2-4/rdr6 rep2 2015-10-21 181 90 Arabidopsis thaliana ILLUMINA 2015-10-21 ERR973028 ERS800577 ERP011201 E-MTAB-3781:ski2-4/rdr6 rep2 SKI2 mutant and RDR6 mutant public 0 miRNA-Seq 50 PRJEB10023 SAMEA3493429 arosab.com ERX1050010 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC SKI2/RDR6 rep1 2015-10-21 147 71 Arabidopsis thaliana ILLUMINA 2015-10-21 ERR973029 ERS800578 ERP011201 E-MTAB-3781:SKI2/RDR6 rep1 wild type genotype public 0 miRNA-Seq 50 PRJEB10023 SAMEA3493430 arosab.com ERX1050011 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC SKI2/RDR6 rep2 2015-10-21 211 103 Arabidopsis thaliana ILLUMINA 2015-10-21 ERR973030 ERS800579 ERP011201 E-MTAB-3781:SKI2/RDR6 rep2 wild type genotype public 0 miRNA-Seq 50 PRJEB10589 SAMEA3517005 MAX PLANCK INSTITUTE FOR EVOLUTIONARY BIOLOGY, TUE ERX1074338 Illumina HiSeq 2000 SINGLE other OTHER WT_rep1 2015-12-01 502 293 Arabidopsis thaliana ILLUMINA 2015-11-27 ERR995332 ERS824154 ERP011857 WT_rep1 Columbia-0 public 0 miRNA-Seq 50 PRJEB10589 SAMEA3517006 MAX PLANCK INSTITUTE FOR EVOLUTIONARY BIOLOGY, TUE ERX1074339 Illumina HiSeq 2000 SINGLE other OTHER WT_rep2 2015-12-01 600 350 Arabidopsis thaliana ILLUMINA 2015-11-27 ERR995333 ERS824155 ERP011857 WT_rep2 Columbia-0 public 0 miRNA-Seq 50 PRJEB10589 SAMEA3517007 MAX PLANCK INSTITUTE FOR EVOLUTIONARY BIOLOGY, TUE ERX1074340 Illumina HiSeq 2000 SINGLE other OTHER hyl1-2_rep1 2015-12-01 358 197 Arabidopsis thaliana ILLUMINA 2015-11-27 ERR995334 ERS824156 ERP011857 hyl1-2_rep1 Columbia-0 public 0 miRNA-Seq 50 PRJEB10589 SAMEA3517008 MAX PLANCK INSTITUTE FOR EVOLUTIONARY BIOLOGY, TUE ERX1074341 Illumina HiSeq 2000 SINGLE other OTHER hyl1-2_rep2 2015-12-01 604 335 Arabidopsis thaliana ILLUMINA 2015-11-27 ERR995335 ERS824157 ERP011857 hyl1-2_rep2 Columbia-0 public 0 miRNA-Seq 50 PRJEB10589 SAMEA3517009 MAX PLANCK INSTITUTE FOR EVOLUTIONARY BIOLOGY, TUE ERX1074342 Illumina HiSeq 2000 SINGLE other OTHER rcf3-3_rep1 2015-12-01 1052 609 Arabidopsis thaliana ILLUMINA 2015-11-27 ERR995336 ERS824158 ERP011857 rcf3-3_rep1 Columbia-0 public 0 miRNA-Seq 50 PRJEB10589 SAMEA3517010 MAX PLANCK INSTITUTE FOR EVOLUTIONARY BIOLOGY, TUE ERX1074343 Illumina HiSeq 2000 SINGLE other OTHER rcf3-3_rep2 2015-12-01 811 468 Arabidopsis thaliana ILLUMINA 2015-11-27 ERR995337 ERS824159 ERP011857 rcf3-3_rep2 Columbia-0 public 0 miRNA-Seq 50 PRJEB10589 SAMEA3517011 MAX PLANCK INSTITUTE FOR EVOLUTIONARY BIOLOGY, TUE ERX1074344 Illumina HiSeq 2000 SINGLE other OTHER rcf3-4_rep1 2015-12-01 510 297 Arabidopsis thaliana ILLUMINA 2015-11-27 ERR995338 ERS824160 ERP011857 rcf3-4_rep1 Columbia-0 public 0 miRNA-Seq 50 PRJEB10589 SAMEA3517012 MAX PLANCK INSTITUTE FOR EVOLUTIONARY BIOLOGY, TUE ERX1074345 Illumina HiSeq 2000 SINGLE other OTHER rcf3-4_rep2 2015-12-01 430 251 Arabidopsis thaliana ILLUMINA 2015-11-27 ERR995339 ERS824161 ERP011857 rcf3-4_rep2 Columbia-0 public 0 OTHER 41 PRJNA107055 SAMN00002025 GEO SRX003075 Illumina Genome Analyzer SINGLE other OTHER abh1-1-floral-smRNA-seq-rep1 2014-05-26 370 2696 Arabidopsis thaliana ILLUMINA 2009-10-19 SRR014221 SRS002207 SRP000622 GSM284748 abh1-1 mutant unopened flower bud public 0 OTHER 41 PRJNA107055 SAMN00002027 GEO SRX003077 Illumina Genome Analyzer SINGLE other OTHER Col-0-floral-smRNA-seq-rep1 2014-05-26 418 3119 Arabidopsis thaliana ILLUMINA 2009-10-19 SRR014224 SRS002209 SRP000622 GSM284747 Columbia-0 wild type unopened flower bud public 0 OTHER 41 PRJNA107055 SAMN00002029 GEO SRX003079 Illumina Genome Analyzer SINGLE other OTHER ein5-6-floral-smRNA-seq-rep1 2014-05-26 360 2645 Arabidopsis thaliana ILLUMINA 2009-10-19 SRR014227 SRS002211 SRP000622 GSM284749 ein5-6 mutant unopened flower bud public 0 OTHER 41 PRJNA107055 SAMN00002030 GEO SRX003080 Illumina Genome Analyzer SINGLE other OTHER ein5-6abh1-1-floral-smRNA-seq-rep1 2014-05-26 410 3071 Arabidopsis thaliana ILLUMINA 2009-10-19 SRR014228 SRS002212 SRP000622 GSM284750 ein5-6 abh1-1 mutant unopened flower bud public 0 OTHER 36 PRJNA125105 SAMN00009042 GEO SRX016993 Illumina Genome Analyzer SINGLE RT-PCR TRANSCRIPTOMIC H2O 2014-05-26 213 151 Arabidopsis thaliana ILLUMINA 2010-03-16 SRR036640 SRS010672 SRP002000 GSM512702 5-6 weeks 5-6 week old Arabidopsis leaves leaves public 0 OTHER 36 PRJNA125105 SAMN00009043 GEO SRX016994 Illumina Genome Analyzer SINGLE RT-PCR TRANSCRIPTOMIC flg22 2014-05-26 234 166 Arabidopsis thaliana ILLUMINA 2010-03-16 SRR036641 SRS010673 SRP002000 GSM512703 5-6 weeks 5-6 week old Arabidopsis leaves leaves public 0 OTHER 44 PRJNA124841 SAMN00009771 GEO SRX017561 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC Col-dcl2,3,4/Col-dcl2,3,4 rep1 2014-05-26 312 174 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037653 SRS024812 SRP002102 GSM518438 Col-dcl2,3,4 root total RNA public 0 OTHER 44 PRJNA124841 SAMN00009772 GEO SRX017562 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxGF-IR/Col-dcl2,3,4 rep1 2014-05-26 292 183 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037654 SRS024813 SRP002102 GSM518439 Col-dcl2,3,4 root total RNA public 0 OTHER 44 PRJNA124841 SAMN00009773 GEO SRX017563 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxGF-IR/Col-dcl2,3,4 rep2 2014-05-26 273 177 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037655 SRS024814 SRP002102 GSM518440 Col-dcl2,3,4 root total RNA public 0 OTHER 44 PRJNA124841 SAMN00009774 GEO SRX017564 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxGF-IR/Col rep1 2014-05-26 267 175 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037656 SRS024815 SRP002102 GSM518441 Col-0 root total RNA public 0 OTHER 44 PRJNA124841 SAMN00009775 GEO SRX017565 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxGF-IR/Col rep2 2014-05-26 323 204 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037657 SRS024816 SRP002102 GSM518442 Col-0 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009776 GEO SRX017566 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC Col/Col rep1 2014-05-26 348 265 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037658 SRS024817 SRP002102 GSM518443 Col-0 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009777 GEO SRX017567 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC Col/Col rep2 2014-05-26 305 233 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037659 SRS024818 SRP002102 GSM518444 Col-0 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009778 GEO SRX017568 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC Col-dcl2,3,4/Col-dcl2,3,4 rep2 2014-05-26 460 335 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037660 SRS024819 SRP002102 GSM518445 Col-dcl2,3,4 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009779 GEO SRX017569 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxGF-IR/Col shoot rep1 2014-05-26 419 330 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037661 SRS024820 SRP002102 GSM518446 C24 shoot total RNA public 0 OTHER 36 PRJNA124841 SAMN00009780 GEO SRX017570 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxGF-IR/Col shoot rep2 2014-05-26 444 346 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037662 SRS024821 SRP002102 GSM518447 C24 shoot total RNA public 0 OTHER 36 PRJNA124841 SAMN00009781 GEO SRX017571 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxA-sde4/Col-dcl2,3,4 rep1 2014-05-26 567 439 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037663 SRS024822 SRP002102 GSM518448 Col-dcl2,3,4 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009782 GEO SRX017572 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxA-sde4/Col-dcl2,3,4 rep2 2014-05-26 570 441 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037664 SRS024823 SRP002102 GSM518449 Col-dcl2,3,4 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009783 GEO SRX017573 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxA/Col-dcl2,3,4 rep1 2014-05-26 581 447 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037665 SRS024824 SRP002102 GSM518450 Col-dcl2,3,4 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009784 GEO SRX017574 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxA/Col-dcl2,3,4 rep2 2014-05-26 570 436 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037666 SRS024825 SRP002102 GSM518451 Col-dcl2,3,4 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009785 GEO SRX017575 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxA-sde4/Col rep1 2014-05-26 513 377 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037667 SRS024826 SRP002102 GSM518452 Col-0 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009786 GEO SRX017576 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxA-sde4/Col rep2 2014-05-26 536 398 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037668 SRS024827 SRP002102 GSM518453 Col-0 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009787 GEO SRX017577 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxA/Col rep1 2014-05-26 537 399 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037669 SRS024828 SRP002102 GSM518454 Col-0 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009788 GEO SRX017578 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxA/Col rep2 2014-05-26 535 396 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037670 SRS024829 SRP002102 GSM518455 Col-0 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009789 GEO SRX017579 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxA-sde4/Col shoot rep1 2014-05-26 488 351 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037671 SRS024830 SRP002102 GSM518456 C24-sde4 shoot total RNA public 0 OTHER 36 PRJNA124841 SAMN00009790 GEO SRX017580 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxA-sde4/Col shoot rep2 2014-05-26 461 330 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037672 SRS024831 SRP002102 GSM518457 C24-sde4 shoot total RNA public 0 OTHER 36 PRJNA124841 SAMN00009791 GEO SRX017581 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxA/Col shoot rep1 2014-05-26 452 328 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037673 SRS024832 SRP002102 GSM518458 C24 shoot total RNA public 0 OTHER 42 PRJNA124841 SAMN00009792 GEO SRX017582 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxA/Col shoot rep2 2014-05-26 755 579 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037674 SRS024833 SRP002102 GSM518459 C24 shoot total RNA public 0 OTHER 36 PRJNA124841 SAMN00009793 GEO SRX017583 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC Col-dcl2,3,4/GxGF-IR rep1 2014-05-26 541 418 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037675 SRS024834 SRP002102 GSM518460 C24 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009794 GEO SRX017584 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC Col-dcl2,3,4/GxGF-IR rep2 2014-05-26 551 428 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037676 SRS024835 SRP002102 GSM518461 C24 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009795 GEO SRX017585 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC Col/GxGF-IR rep1 2014-05-26 554 426 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037677 SRS024836 SRP002102 GSM518462 C24 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009796 GEO SRX017586 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC Col/GxGF-IR rep2 2014-05-26 509 397 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037678 SRS024837 SRP002102 GSM518463 C24 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009797 GEO SRX017587 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxGF-IR/GFP rep1 2014-05-26 550 425 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037679 SRS024838 SRP002102 GSM518464 C24 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009798 GEO SRX017588 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxGF-IR/GFP rep2 2014-05-26 557 432 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037680 SRS024839 SRP002102 GSM518465 C24 root total RNA public 0 OTHER 36 PRJNA124841 SAMN00009799 GEO SRX017589 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxGF-IR/GFP shoot rep1 2014-05-26 544 415 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037681 SRS024840 SRP002102 GSM518466 C24 shoot total RNA public 0 OTHER 36 PRJNA124841 SAMN00009800 GEO SRX017590 Illumina Genome Analyzer II SINGLE other TRANSCRIPTOMIC GxGF-IR/GFP shoot rep2 2014-05-26 559 420 Arabidopsis thaliana ILLUMINA 2010-03-29 SRR037682 SRS024841 SRP002102 GSM518467 C24 shoot total RNA public 0 miRNA-Seq 49 PRJNA291520 SAMN03945164 GEO SRX1125281 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-07-30 517 366 Arabidopsis thaliana ILLUMINA 2015-11-19 SRR2135661 SRS1017442 SRP061843 GSM1838519 Root Segments public 0 miRNA-Seq 49 PRJNA291520 SAMN03945163 GEO SRX1125280 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-07-30 448 320 Arabidopsis thaliana ILLUMINA 2015-11-19 SRR2135660 SRS1017443 SRP061843 GSM1838518 Root Segments public 0 miRNA-Seq 49 PRJNA291520 SAMN03945162 GEO SRX1125279 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-07-30 419 297 Arabidopsis thaliana ILLUMINA 2015-11-19 SRR2135659 SRS1017444 SRP061843 GSM1838517 Root Segments public 0 miRNA-Seq 49 PRJNA291520 SAMN03945161 GEO SRX1125278 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-07-30 466 333 Arabidopsis thaliana ILLUMINA 2015-11-19 SRR2135658 SRS1017445 SRP061843 GSM1838516 Hand Dissected Galls public 0 miRNA-Seq 49 PRJNA291520 SAMN03945160 GEO SRX1125277 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-07-30 466 331 Arabidopsis thaliana ILLUMINA 2015-11-19 SRR2135657 SRS1017446 SRP061843 GSM1838515 Hand Dissected Galls public 0 miRNA-Seq 49 PRJNA291520 SAMN03945159 GEO SRX1125276 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-07-30 481 339 Arabidopsis thaliana ILLUMINA 2015-11-19 SRR2135656 SRS1017447 SRP061843 GSM1838514 Hand Dissected Galls public 0 ncRNA-Seq 180 PRJNA291775 SAMN03952711 GEO SRX1131578 Illumina HiSeq 2000 PAIRED size fractionation TRANSCRIPTOMIC 2015-08-03 4623 1820 Arabidopsis thaliana ILLUMINA 2016-03-18 SRR2142006 SRS1022123 SRP061947 GSM1842722 dcl2/3/4/nrpd1 mutant seedling seedling public 0 ncRNA-Seq 180 PRJNA291775 SAMN03952712 GEO SRX1131579 Illumina HiSeq 2000 PAIRED size fractionation TRANSCRIPTOMIC 2015-08-03 5379 2119 Arabidopsis thaliana ILLUMINA 2016-03-18 SRR2142007 SRS1022124 SRP061947 GSM1842723 nrpd1 mutant seedling seedling public 0 miRNA-Seq 51 PRJNA291954 SAMN03956916 SRX1133338 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC dbr1-2_small_RNA-seq1 2015-08-05 457 331 Arabidopsis thaliana ILLUMINA 2016-08-04 SRR2145249 SRS1023670 SRP062035 dbr1-2_small_RNA-seq1 inflorescence public 0 miRNA-Seq 51 PRJNA291954 SAMN03956915 SRX1133337 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Col_small_RNA-seq 2015-08-05 2537 1804 Arabidopsis thaliana ILLUMINA 2016-08-04 SRR2145250 SRS1023671 SRP062035 Col_small_RNA-seq inflorescence public 0 miRNA-Seq 51 PRJNA291954 SAMN03956917 SRX1133339 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC dbr1-2_small_RNA-seq2 2015-08-05 510 374 Arabidopsis thaliana ILLUMINA 2016-08-04 SRR2145251 SRS1023672 SRP062035 dbr1-2_small_RNA-seq2 inflorescence public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979626 GEO SRX1134791 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1707 1049 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147203 SRS1027125 SRP062104 GSM1845227 Columbia RTL1 with 35S promoter and dcl2 dcl3 dcl4 triple mutant floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979620 GEO SRX1134789 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1664 1000 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147201 SRS1027126 SRP062104 GSM1845225 Columbia RTL1 with 35S promoter floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979619 GEO SRX1134788 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1747 1096 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147200 SRS1027127 SRP062104 GSM1845224 Columbia dcl2 dcl3 dcl4 triple mutant floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979625 GEO SRX1134790 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1802 1080 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147202 SRS1027128 SRP062104 GSM1845226 Columbia RTL1 with 35S promoter floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979618 GEO SRX1134787 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1778 1084 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147199 SRS1027129 SRP062104 GSM1845223 Columbia dcl2 dcl3 dcl4 triple mutant floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979617 GEO SRX1134786 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1790 1101 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147198 SRS1027130 SRP062104 GSM1845222 Columbia dcl2 dcl3 dcl4 triple mutant floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979621 GEO SRX1134785 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1803 1097 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147197 SRS1027131 SRP062104 GSM1845221 Columbia RTL2 with 35S promoter and dcl2 dcl3 dcl4 triple mutant floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979624 GEO SRX1134784 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1986 1211 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147196 SRS1027132 SRP062104 GSM1845220 Columbia RTL2 with 35S promoter and dcl2 dcl3 dcl4 triple mutant floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979623 GEO SRX1134783 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1721 1053 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147195 SRS1027133 SRP062104 GSM1845219 Columbia RTL2 with 35S promoter and dcl2 dcl3 dcl4 triple mutant floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979622 GEO SRX1134782 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1909 1133 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147194 SRS1027134 SRP062104 GSM1845218 Columbia RTL2 with 35S promoter floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979612 GEO SRX1134781 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1866 1116 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147193 SRS1027135 SRP062104 GSM1845217 Columbia RTL2 with 35S promoter floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979611 GEO SRX1134780 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1764 1057 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147192 SRS1027136 SRP062104 GSM1845216 Columbia RTL2 with 35S promoter floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979610 GEO SRX1134779 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1696 1017 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147191 SRS1027137 SRP062104 GSM1845215 Columbia rtl2 mutant floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979609 GEO SRX1134778 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1838 1087 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147190 SRS1027138 SRP062104 GSM1845214 Columbia rtl2 mutant floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979616 GEO SRX1134777 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1541 923 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147189 SRS1027139 SRP062104 GSM1845213 Columbia rtl2 mutant floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979615 GEO SRX1134776 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1599 974 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147188 SRS1027140 SRP062104 GSM1845212 Columbia wt floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979614 GEO SRX1134775 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1827 1087 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147187 SRS1027141 SRP062104 GSM1845211 Columbia wt floral tissue flower public 0 ncRNA-Seq 101 PRJNA292074 SAMN03979613 GEO SRX1134774 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-06 1833 1116 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR2147186 SRS1027142 SRP062104 GSM1845210 Columbia wt floral tissue flower public 0 ncRNA-Seq 51 PRJNA261075 SAMN03981865 GEO SRX1142682 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-12 1465 1313 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2155690 SRS1028905 SRP047143 GSM1848710 Columbia nrpb2 flowers_40_sRNA_nrpb2_b immature inflorescence public 0 ncRNA-Seq 51 PRJNA261075 SAMN03981863 GEO SRX1142680 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-12 1824 1597 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2155688 SRS1028976 SRP047143 GSM1848708 Columbia wildtype flowers_38_sRNA_WT_b immature inflorescence public 0 ncRNA-Seq 51 PRJNA261075 SAMN03981864 GEO SRX1142681 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-12 1672 1469 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2155689 SRS1028977 SRP047143 GSM1848709 Columbia nrpb2 flowers_39_sRNA_nrpb2_a immature inflorescence public 0 ncRNA-Seq 51 PRJNA261075 SAMN03981862 GEO SRX1142679 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-12 1639 1430 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2155687 SRS1028978 SRP047143 GSM1848707 Columbia wildtype flowers_37_sRNA_WT_a immature inflorescence public 0 ncRNA-Seq 50 PRJNA294091 SAMN04014686 GEO SRX1166211 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-27 3548 2225 Arabidopsis thaliana ILLUMINA 2016-03-11 SRR2187574 SRS1046525 SRP062908 GSM1862860 two weeks urt1 mutant (Salk_087647C) seedlings, urt1 mutant seedlings public 0 ncRNA-Seq 50 PRJNA294091 SAMN04014685 GEO SRX1166210 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-27 2805 1725 Arabidopsis thaliana ILLUMINA 2016-03-11 SRR2187573 SRS1046526 SRP062908 GSM1862859 two weeks urt1 mutant (Salk_087647C) seedlings, urt1 mutant seedlings public 0 ncRNA-Seq 50 PRJNA294091 SAMN04014684 GEO SRX1166209 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-27 1706 1087 Arabidopsis thaliana ILLUMINA 2016-03-11 SRR2187572 SRS1046527 SRP062908 GSM1862858 two weeks Col0 WT seedlings, WT seedlings public 0 ncRNA-Seq 50 PRJNA294091 SAMN04014683 GEO SRX1166208 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-27 2304 1406 Arabidopsis thaliana ILLUMINA 2016-03-11 SRR2187571 SRS1046528 SRP062908 GSM1862857 two weeks Col0 WT seedlings, WT seedlings public 0 miRNA-Seq 75 PRJNA294285 SAMN04019034 GEO SRX1174984 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-31 2112 1314 Arabidopsis thaliana ILLUMINA 2016-02-01 SRR2219516 SRS1050117 SRP063002 GSM1863370 FRI;flc-3 fully-expanded leaf 11 (cauline leaf) public 0 miRNA-Seq 75 PRJNA294285 SAMN04019033 GEO SRX1174983 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-31 1791 1117 Arabidopsis thaliana ILLUMINA 2016-02-01 SRR2219515 SRS1050118 SRP063002 GSM1863369 FRI;flc-3 fully-expanded leaf 9 (rosette leaf) public 0 miRNA-Seq 75 PRJNA294285 SAMN04019032 GEO SRX1174982 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-31 1245 778 Arabidopsis thaliana ILLUMINA 2016-02-01 SRR2219514 SRS1050119 SRP063002 GSM1863368 FRI;flc-3 fully-expanded leaf 3 (rosette leaf) public 0 miRNA-Seq 75 PRJNA294285 SAMN04019031 GEO SRX1174981 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-31 596 379 Arabidopsis thaliana ILLUMINA 2016-02-01 SRR2219513 SRS1050120 SRP063002 GSM1863367 FRI;flc-3 fully-expanded leaves 1+2 (rosette leaf) public 0 miRNA-Seq 75 PRJNA294285 SAMN04019030 GEO SRX1174980 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-31 451 256 Arabidopsis thaliana ILLUMINA 2016-02-01 SRR2219512 SRS1050121 SRP063002 GSM1863366 FRI;FLC fully-expanded leaf 11 (rosette leaf) public 0 miRNA-Seq 75 PRJNA294285 SAMN04019029 GEO SRX1174979 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-31 840 478 Arabidopsis thaliana ILLUMINA 2016-02-01 SRR2219511 SRS1050122 SRP063002 GSM1863365 FRI;FLC fully-expanded leaf 9 (rosette leaf) public 0 miRNA-Seq 75 PRJNA294285 SAMN04019028 GEO SRX1174978 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-31 952 536 Arabidopsis thaliana ILLUMINA 2016-02-01 SRR2219510 SRS1050123 SRP063002 GSM1863364 FRI;FLC cotyledons public 0 miRNA-Seq 75 PRJNA294285 SAMN04019027 GEO SRX1174977 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-31 1975 1246 Arabidopsis thaliana ILLUMINA 2016-02-01 SRR2219509 SRS1050124 SRP063002 GSM1863363 FRI;flc-3 shoot apices plus leaf primordia = 1 mm public 0 miRNA-Seq 75 PRJNA294285 SAMN04019025 GEO SRX1174976 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-31 1462 916 Arabidopsis thaliana ILLUMINA 2016-02-01 SRR2219508 SRS1050125 SRP063002 GSM1863362 FRI;flc-3 shoot apices plus leaf primordia = 1 mm public 0 miRNA-Seq 75 PRJNA294285 SAMN04019023 GEO SRX1174975 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-08-31 1126 635 Arabidopsis thaliana ILLUMINA 2016-02-01 SRR2219507 SRS1050126 SRP063002 GSM1863361 FRI;FLC shoot apices plus leaf primordia = 1 mm public 0 miRNA-Seq 51 PRJNA295538 SAMN04075535 GEO SRX1240280 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-09-15 3421 2512 Arabidopsis thaliana ILLUMINA 2016-03-31 SRR2391665 SRS1067343 SRP063657 GSM1876244 Col-0 rdr/1/2/6 whole plant whole plant public 0 miRNA-Seq 51 PRJNA295538 SAMN04075534 GEO SRX1240279 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-09-15 3414 2492 Arabidopsis thaliana ILLUMINA 2016-03-31 SRR2391664 SRS1067344 SRP063657 GSM1876243 Col-0 rdr/1/2/6 whole plant whole plant public 0 miRNA-Seq 51 PRJNA295538 SAMN04075533 GEO SRX1240278 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-09-15 969 720 Arabidopsis thaliana ILLUMINA 2016-03-31 SRR2391663 SRS1067345 SRP063657 GSM1876242 Col-0 rdr/1/2/6 whole plant whole plant public 0 miRNA-Seq 51 PRJNA295538 SAMN04075532 GEO SRX1240277 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-09-15 965 713 Arabidopsis thaliana ILLUMINA 2016-03-31 SRR2391662 SRS1067348 SRP063657 GSM1876241 Col-0 rdr/1/2/6 whole plant whole plant public 0 miRNA-Seq 51 PRJNA295538 SAMN04075531 GEO SRX1240276 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-09-15 1892 1391 Arabidopsis thaliana ILLUMINA 2016-03-31 SRR2391661 SRS1067349 SRP063657 GSM1876240 Col-0 wildtype whole plant whole plant public 0 miRNA-Seq 51 PRJNA295538 SAMN04075530 GEO SRX1240275 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-09-15 1884 1377 Arabidopsis thaliana ILLUMINA 2016-03-31 SRR2391660 SRS1067350 SRP063657 GSM1876239 Col-0 wildtype whole plant whole plant public 0 miRNA-Seq 51 PRJNA295538 SAMN04075529 GEO SRX1240274 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-09-15 4471 3275 Arabidopsis thaliana ILLUMINA 2016-03-31 SRR2391659 SRS1067351 SRP063657 GSM1876238 Col-0 wildtype whole plant whole plant public 0 miRNA-Seq 51 PRJNA295538 SAMN04075528 GEO SRX1240273 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-09-15 4452 3241 Arabidopsis thaliana ILLUMINA 2016-03-31 SRR2391658 SRS1067352 SRP063657 GSM1876237 Col-0 wildtype whole plant whole plant public 0 miRNA-Seq 49 PRJNA299084 SAMN04193455 BIOZERON SRX1351932 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-20 1163 796 Arabidopsis thaliana ILLUMINA 2016-05-04 SRR2721747 SRS1119935 SRP064944 nrpd1-3 small RNA 12-day old seedling public 0 miRNA-Seq 47 PRJNA299084 SAMN04193456 BIOZERON SRX1351933 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-20 1223 717 Arabidopsis thaliana ILLUMINA 2016-05-04 SRR2721746 SRS1119936 SRP064944 C0l-0 small RNA 12-day old seedling public 0 miRNA-Seq 47 PRJNA299084 SAMN04193457 BIOZERON SRX1351934 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-20 1087 699 Arabidopsis thaliana ILLUMINA 2016-05-04 SRR2721745 SRS1119937 SRP064944 met18-2 small RNA 12-day old seedling public 0 miRNA-Seq 47 PRJNA299084 SAMN04193458 BIOZERON SRX1352082 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-20 1582 1014 Arabidopsis thaliana ILLUMINA 2016-05-04 SRR2721744 SRS1119968 SRP064944 nrpe1-11 small RNA 12-day old seedling public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218030 GEO SRX1388331 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 714 485 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831417 SRS1136236 SRP065333 GSM1919625 Three-weeks-old atrimmer2 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218029 GEO SRX1388330 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 762 551 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831416 SRS1136237 SRP065333 GSM1919624 Three-weeks-old atrimmer2 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218028 GEO SRX1388329 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 529 347 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831415 SRS1136238 SRP065333 GSM1919623 Three-weeks-old atrimmer2 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218027 GEO SRX1388328 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 933 630 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831414 SRS1136239 SRP065333 GSM1919622 Three-weeks-old rrp6l1 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218026 GEO SRX1388327 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 656 473 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831413 SRS1136240 SRP065333 GSM1919621 Three-weeks-old rrp6l1 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218025 GEO SRX1388326 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 547 360 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831412 SRS1136241 SRP065333 GSM1919620 Three-weeks-old rrp6l1 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218024 GEO SRX1388325 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 836 561 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831411 SRS1136242 SRP065333 GSM1919619 Three-weeks-old Wild type Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218023 GEO SRX1388324 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 608 440 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831410 SRS1136243 SRP065333 GSM1919618 Three-weeks-old Wild type Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04217992 GEO SRX1388323 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 720 481 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831409 SRS1136244 SRP065333 GSM1919617 Three-weeks-old Wild type Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04217991 GEO SRX1388322 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 885 637 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831408 SRS1136245 SRP065333 GSM1919616 Three-weeks-old ago4 dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04217990 GEO SRX1388321 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 774 556 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831407 SRS1136246 SRP065333 GSM1919615 Three-weeks-old ago4 dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04217989 GEO SRX1388320 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 816 600 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831406 SRS1136247 SRP065333 GSM1919614 Three-weeks-old ago4 dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218060 GEO SRX1388319 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 904 638 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831405 SRS1136248 SRP065333 GSM1919613 Three-weeks-old ago4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218059 GEO SRX1388318 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 883 641 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831404 SRS1136249 SRP065333 GSM1919612 Three-weeks-old Wild type Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218058 GEO SRX1388317 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 780 553 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831403 SRS1136250 SRP065333 GSM1919611 Eight-weeks-old nrpd1 dcl2/3/4 Embryo Embryo public 0 ncRNA-Seq 49 PRJNA300285 SAMN04217988 GEO SRX1388316 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 492 361 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831402 SRS1136251 SRP065333 GSM1919610 Eight-weeks-old dcl2/3/4 Embryo Embryo public 0 ncRNA-Seq 49 PRJNA300285 SAMN04217987 GEO SRX1388315 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 841 593 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831401 SRS1136252 SRP065333 GSM1919609 Eight-weeks-old Wild type Embryo Embryo public 0 ncRNA-Seq 49 PRJNA300285 SAMN04217986 GEO SRX1388314 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 841 580 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831400 SRS1136253 SRP065333 GSM1919608 Eight-weeks-old nrpd1 dcl2/3/4 Endosperm Endosperm public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218061 GEO SRX1388313 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 798 572 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831399 SRS1136254 SRP065333 GSM1919607 Eight-weeks-old dcl2/3/4 Endosperm Endosperm public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218057 GEO SRX1388312 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 690 490 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831398 SRS1136255 SRP065333 GSM1919606 Eight-weeks-old Wild type Endosperm Endosperm public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218056 GEO SRX1388311 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 1085 813 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831397 SRS1136256 SRP065333 GSM1919605 Five-weeks-old nrpd1 dcl2/3/4 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218055 GEO SRX1388310 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 1350 999 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831396 SRS1136257 SRP065333 GSM1919604 Five-weeks-old nrpd1 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218054 GEO SRX1388309 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 938 700 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831395 SRS1136258 SRP065333 GSM1919603 Five-weeks-old dcl2/3/4 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218053 GEO SRX1388308 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 1381 1016 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831394 SRS1136259 SRP065333 GSM1919602 Five-weeks-old Wild type Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218052 GEO SRX1388307 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 1029 757 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831393 SRS1136260 SRP065333 GSM1919601 Five-weeks-old nrpd1 dcl2/3/4 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218051 GEO SRX1388306 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 1023 750 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831392 SRS1136261 SRP065333 GSM1919600 Five-weeks-old nrpd1 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218050 GEO SRX1388305 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 822 591 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831391 SRS1136262 SRP065333 GSM1919599 Five-weeks-old dcl2/3/4 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218049 GEO SRX1388304 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 999 719 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831390 SRS1136263 SRP065333 GSM1919598 Five-weeks-old Wild type Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218048 GEO SRX1388303 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 943 699 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831389 SRS1136264 SRP065333 GSM1919597 Five-weeks-old nrpd1 dcl2/3/4 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218047 GEO SRX1388302 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 976 729 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831388 SRS1136265 SRP065333 GSM1919596 Five-weeks-old nrpd1 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218046 GEO SRX1388301 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 820 600 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831387 SRS1136266 SRP065333 GSM1919595 Five-weeks-old dcl2/3/4 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218045 GEO SRX1388300 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 874 636 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831386 SRS1136267 SRP065333 GSM1919594 Five-weeks-old Wild type Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218044 GEO SRX1388299 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 714 504 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831385 SRS1136268 SRP065333 GSM1919593 Five-weeks-old nrpd1 dcl2/3/4 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218043 GEO SRX1388298 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 658 461 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831384 SRS1136269 SRP065333 GSM1919592 Five-weeks-old nrpd1 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218042 GEO SRX1388297 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 627 440 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831383 SRS1136270 SRP065333 GSM1919591 Five-weeks-old dcl2/3/4 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218041 GEO SRX1388296 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 563 389 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831382 SRS1136271 SRP065333 GSM1919590 Five-weeks-old Wild type Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218040 GEO SRX1388295 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 532 364 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831381 SRS1136272 SRP065333 GSM1919589 Five-weeks-old nrpd1 dcl2/3/4 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218039 GEO SRX1388294 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 725 492 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831380 SRS1136273 SRP065333 GSM1919588 Five-weeks-old nrpd1 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218038 GEO SRX1388293 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 504 339 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831379 SRS1136274 SRP065333 GSM1919587 Five-weeks-old dcl2/3/4 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218037 GEO SRX1388292 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 679 446 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831378 SRS1136275 SRP065333 GSM1919586 Five-weeks-old Wild type Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218036 GEO SRX1388291 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 821 511 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831377 SRS1136276 SRP065333 GSM1919585 Five-weeks-old nrpd1 dcl2/3/4 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218035 GEO SRX1388290 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 738 464 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831376 SRS1136277 SRP065333 GSM1919584 Five-weeks-old nrpd1 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218034 GEO SRX1388289 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 540 349 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831375 SRS1136278 SRP065333 GSM1919583 Five-weeks-old dcl2/3/4 Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218033 GEO SRX1388288 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 772 494 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831374 SRS1136279 SRP065333 GSM1919582 Five-weeks-old Wild type Five-wks-old flowers flowers public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218022 GEO SRX1388286 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 629 453 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831372 SRS1136280 SRP065333 GSM1919580 Three-weeks-old dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218032 GEO SRX1388287 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 698 489 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831373 SRS1136281 SRP065333 GSM1919581 Three-weeks-old dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218021 GEO SRX1388285 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 990 664 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831371 SRS1136282 SRP065333 GSM1919579 Three-weeks-old dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218020 GEO SRX1388284 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 645 450 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831370 SRS1136283 SRP065333 GSM1919578 Three-weeks-old Wild type Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218019 GEO SRX1388283 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 988 685 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831369 SRS1136284 SRP065333 GSM1919577 Three-weeks-old Wild type Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218018 GEO SRX1388282 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 1161 753 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831368 SRS1136285 SRP065333 GSM1919576 Three-weeks-old Wild type Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218017 GEO SRX1388281 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 493 350 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831367 SRS1136286 SRP065333 GSM1919575 Three-weeks-old rdr2 dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218016 GEO SRX1388280 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 1588 1096 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831366 SRS1136287 SRP065333 GSM1919574 Three-weeks-old rdr2 dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218015 GEO SRX1388279 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 616 434 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831365 SRS1136288 SRP065333 GSM1919573 Three-weeks-old rdr2 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218014 GEO SRX1388278 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 971 674 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831364 SRS1136289 SRP065333 GSM1919572 Three-weeks-old rdr2 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218013 GEO SRX1388277 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 723 511 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831363 SRS1136290 SRP065333 GSM1919571 Three-weeks-old nrpd1 dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218012 GEO SRX1388276 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 1182 827 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831362 SRS1136291 SRP065333 GSM1919570 Three-weeks-old nrpd1 dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218011 GEO SRX1388275 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 660 465 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831361 SRS1136292 SRP065333 GSM1919569 Three-weeks-old nrpd1 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218010 GEO SRX1388274 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 1256 888 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831360 SRS1136293 SRP065333 GSM1919568 Three-weeks-old nrpd1 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218009 GEO SRX1388273 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 710 488 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831359 SRS1136294 SRP065333 GSM1919567 Three-weeks-old Wild type Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218008 GEO SRX1388272 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 1281 888 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831358 SRS1136295 SRP065333 GSM1919566 Three-weeks-old Wild type Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218007 GEO SRX1388271 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 1127 739 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831357 SRS1136296 SRP065333 GSM1919565 Three-weeks-old dcl1/2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218006 GEO SRX1388270 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 844 559 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831356 SRS1136297 SRP065333 GSM1919564 Three-weeks-old dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218005 GEO SRX1388269 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 844 554 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831355 SRS1136298 SRP065333 GSM1919563 Three-weeks-old Wild type Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218003 GEO SRX1388267 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 471 331 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831353 SRS1136299 SRP065333 GSM1919561 Three-weeks-old dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218002 GEO SRX1388266 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 1429 996 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831352 SRS1136300 SRP065333 GSM1919560 Three-weeks-old dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218001 GEO SRX1388265 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 878 665 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831351 SRS1136301 SRP065333 GSM1919559 Three-weeks-old dcl1/2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218000 GEO SRX1388264 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 717 510 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831350 SRS1136302 SRP065333 GSM1919558 Three-weeks-old dcl1/2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04218004 GEO SRX1388268 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 932 682 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831354 SRS1136303 SRP065333 GSM1919562 Three-weeks-old dcl2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 49 PRJNA300285 SAMN04217999 GEO SRX1388263 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-10-27 1112 772 Arabidopsis thaliana ILLUMINA 2015-12-17 SRR2831349 SRS1136304 SRP065333 GSM1919557 Three-weeks-old dcl1/2/3/4 Three-wks-old seedlings seedlings public 0 ncRNA-Seq 50 PRJNA301359 SAMN04244369 GEO SRX1420968 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-11-20 1269 843 Arabidopsis thaliana ILLUMINA 2016-11-14 SRR2927779 SRS1153990 SRP065858 GSM1931310 Col-0 dcl4-2 mutant expressing cytosplasmic DCL4 from Ubq10 promoter Siliques siliques public 0 ncRNA-Seq 50 PRJNA301359 SAMN04244368 GEO SRX1420967 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-11-20 1554 1040 Arabidopsis thaliana ILLUMINA 2016-11-14 SRR2927778 SRS1153991 SRP065858 GSM1931309 Col-0 dcl4-2 mutant expressing nuclear DCL4 from Ubq10 promoter Siliques siliques public 0 ncRNA-Seq 50 PRJNA301359 SAMN04244367 GEO SRX1420966 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-11-20 1081 726 Arabidopsis thaliana ILLUMINA 2016-11-14 SRR2927777 SRS1153992 SRP065858 GSM1931308 Col-0 dcl4-2 mutant Siliques siliques public 0 ncRNA-Seq 50 PRJNA301359 SAMN04244366 GEO SRX1420965 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-11-20 916 617 Arabidopsis thaliana ILLUMINA 2016-11-14 SRR2927776 SRS1153993 SRP065858 GSM1931307 Col-0 wild type Siliques siliques public 0 miRNA-Seq 50 PRJNA306778 SAMN04362877 GEO SRX1497703 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-12-22 644 420 Arabidopsis thaliana ILLUMINA 2016-05-26 SRR3048748 SRS1219347 SRP067709 GSM1979039 Columbia wild type inflorescense, WT inflorescence public 0 miRNA-Seq 50 PRJNA306778 SAMN04362878 GEO SRX1497704 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-12-22 433 282 Arabidopsis thaliana ILLUMINA 2016-05-26 SRR3048749 SRS1219348 SRP067709 GSM1979040 Columbia wild type inflorescense, WT inflorescence public 0 miRNA-Seq 50 PRJNA306778 SAMN04362876 GEO SRX1497702 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-12-22 505 329 Arabidopsis thaliana ILLUMINA 2016-05-26 SRR3048747 SRS1219350 SRP067709 GSM1979038 Columbia wild type inflorescense, WT inflorescence public 0 ncRNA-Seq 50 PRJNA308232 SAMN04388516 GEO SRX1521981 Illumina Genome Analyzer SINGLE size fractionation TRANSCRIPTOMIC 2016-01-07 559 360 Arabidopsis thaliana ILLUMINA 2016-08-17 SRR3091432 SRS1239984 SRP068209 GSM2031997 nrpd1a (Salk_583051) seedlings seedling public 0 ncRNA-Seq 20 PRJNA308232 SAMN04388515 GEO SRX1521980 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-01-12 1244 759 Arabidopsis thaliana ILLUMINA 2016-08-17 SRR3091431 SRS1239985 SRP068209 GSM2031996 ddb2-3 (DsLoxHs195_05H) seedlings seedling public 0 ncRNA-Seq 19 PRJNA308232 SAMN04388514 GEO SRX1521979 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-01-11 998 628 Arabidopsis thaliana ILLUMINA 2016-08-17 SRR3091430 SRS1239986 SRP068209 GSM2031995 WT seedlings seedling public 0 miRNA-Seq 51 PRJNA310817 SAMN04455899 SRX1560715 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC smek1-1_Small_RNA_seq 2016-02-04 1599 1064 Arabidopsis thaliana ILLUMINA 2017-02-02 SRR3144591 SRS1275300 SRP069279 smek1-1_small_RNA_seq inflorescence public 0 miRNA-Seq 51 PRJNA310817 SAMN04455901 SRX1560716 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC smek1-2_Small_RNA_seq 2016-02-04 1290 836 Arabidopsis thaliana ILLUMINA 2017-02-02 SRR3144592 SRS1275301 SRP069279 smek1-2_small_RNA_seq inflorescence public 0 miRNA-Seq 21 PRJNA312591 SAMN04503259 GEO SRX1592749 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-02-19 132 104 Arabidopsis thaliana ILLUMINA 2016-05-31 SRR3178445 SRS1305146 SRP070554 GSM2066573 8 days old Columbia ago2-1;PAGO2-HF-AGO2 AGO2_seedlings whole seedlings public 0 miRNA-Seq 21 PRJNA312591 SAMN04503258 GEO SRX1592748 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-02-19 157 125 Arabidopsis thaliana ILLUMINA 2016-05-31 SRR3178444 SRS1305147 SRP070554 GSM2066572 8 days old Columbia ago2-1;PAGO2-HF-AGO2 AGO2_seedlings whole seedlings public 0 miRNA-Seq 23 PRJNA312591 SAMN04503257 GEO SRX1592747 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-02-19 409 312 Arabidopsis thaliana ILLUMINA 2016-05-31 SRR3178443 SRS1305148 SRP070554 GSM2066571 8 days old Columbia ago3-2;PAGO3-FM-AGO3 AGO3_seedlings whole seedlings public 0 miRNA-Seq 23 PRJNA312591 SAMN04503256 GEO SRX1592746 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-02-19 404 311 Arabidopsis thaliana ILLUMINA 2016-05-31 SRR3178442 SRS1305149 SRP070554 GSM2066570 8 days old Columbia ago3-2;PAGO3-FM-AGO3 AGO3_seedlings whole seedlings public 0 miRNA-Seq 23 PRJNA312591 SAMN04503255 GEO SRX1592745 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-02-19 392 298 Arabidopsis thaliana ILLUMINA 2016-05-31 SRR3178441 SRS1305150 SRP070554 GSM2066569 8 days old Columbia ago3-2;PAGO3-FM-AGO3 AGO3_seedlings whole seedlings public 0 miRNA-Seq 22 PRJNA312591 SAMN04503254 GEO SRX1592744 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-02-19 87 69 Arabidopsis thaliana ILLUMINA 2016-05-31 SRR3178440 SRS1305151 SRP070554 GSM2066568 8 days old Columbia WT WT_seedlings whole seedlings public 0 miRNA-Seq 22 PRJNA312591 SAMN04503253 GEO SRX1592743 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-02-19 146 116 Arabidopsis thaliana ILLUMINA 2016-05-31 SRR3178439 SRS1305152 SRP070554 GSM2066567 8 days old Columbia WT WT_seedlings whole seedlings public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543524 GEO SRX1621688 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 1032 686 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214232 SRS1330260 SRP042618 GSM2084483 RNA from pnh-2 seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543523 GEO SRX1621687 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 784 513 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214231 SRS1330261 SRP042618 GSM2084482 RNA from pnh-2 seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543522 GEO SRX1621686 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 813 539 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214230 SRS1330262 SRP042618 GSM2084481 RNA from pnh-2 seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543521 GEO SRX1621685 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 578 378 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214229 SRS1330263 SRP042618 GSM2084480 RNA from Ler seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543520 GEO SRX1621684 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 447 296 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214228 SRS1330264 SRP042618 GSM2084479 RNA from Ler seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543519 GEO SRX1621683 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 673 444 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214227 SRS1330265 SRP042618 GSM2084478 RNA from Ler seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543518 GEO SRX1621682 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 953 632 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214226 SRS1330266 SRP042618 GSM2084477 RNA from ago10-13 seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543517 GEO SRX1621681 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 954 627 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214225 SRS1330267 SRP042618 GSM2084476 RNA from ago10-13 seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543516 GEO SRX1621680 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 936 620 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214224 SRS1330268 SRP042618 GSM2084475 RNA from ago10-13 seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543515 GEO SRX1621679 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 1430 888 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214223 SRS1330269 SRP042618 GSM2084474 RNA from sdn1-1 sdn2-1 seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543514 GEO SRX1621678 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 1549 981 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214222 SRS1330270 SRP042618 GSM2084473 RNA from sdn1-1 sdn2-1 seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543513 GEO SRX1621677 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 996 643 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214221 SRS1330271 SRP042618 GSM2084472 RNA from hen1-8 sdn1-1 sdn2-1 seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543512 GEO SRX1621676 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 366 236 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214220 SRS1330272 SRP042618 GSM2084471 RNA from hen1-8 sdn1-1 sdn2-1 seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543511 GEO SRX1621675 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 576 355 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214219 SRS1330273 SRP042618 GSM2084470 RNA from hen1-8 seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543510 GEO SRX1621674 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 563 350 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214218 SRS1330274 SRP042618 GSM2084469 RNA from hen1-8 seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543509 GEO SRX1621673 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 1285 796 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214217 SRS1330275 SRP042618 GSM2084468 RNA from Col seedlings seedling public 0 ncRNA-Seq 51 PRJNA251351 SAMN04543508 GEO SRX1621672 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-09 1546 971 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR3214216 SRS1330276 SRP042618 GSM2084467 RNA from Col seedlings seedling public 0 miRNA-Seq 50 PRJNA314979 SAMN04546451 GEO SRX1629221 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-11 616 336 Arabidopsis thaliana ILLUMINA 2016-05-19 SRR3222445 SRS1336846 SRP071666 GSM2086249 Col-0 wild-type immature inflorescence public 0 miRNA-Seq 50 PRJNA314979 SAMN04546450 GEO SRX1629220 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-11 446 239 Arabidopsis thaliana ILLUMINA 2016-05-19 SRR3222444 SRS1336847 SRP071666 GSM2086248 Col-0 wild-type immature inflorescence public 0 miRNA-Seq 50 PRJNA314979 SAMN04546449 GEO SRX1629219 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-11 364 192 Arabidopsis thaliana ILLUMINA 2016-05-19 SRR3222443 SRS1336848 SRP071666 GSM2086247 Col-0 wild-type immature inflorescence public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575714 SRX1656603 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Col_0 2016-03-23 239 89 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285967 SRS1356745 SRP072220 Cvi_0 Cvi developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575720 SRX1656619 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Col_6 2016-03-23 282 105 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285983 SRS1356746 SRP072220 Cvi_6 Cvi developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575719 SRX1656618 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Col_5 2016-03-23 187 72 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285982 SRS1356747 SRP072220 Cvi_5 Cvi developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575718 SRX1656617 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Col_4 2016-03-23 194 75 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285981 SRS1356748 SRP072220 Cvi_4 Cvi developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575717 SRX1656616 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Col_3 2016-03-23 168 62 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285980 SRS1356749 SRP072220 Cvi_3 Cvi developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575716 SRX1656615 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Col_2 2016-03-23 245 91 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285979 SRS1356750 SRP072220 Cvi_2 Cvi developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575733 SRX1656614 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi_9 2016-03-23 214 85 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285978 SRS1356751 SRP072220 Col_9 Columbia developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575732 SRX1656613 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi_8 2016-03-23 213 83 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285977 SRS1356752 SRP072220 Col_8 Columbia developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575731 SRX1656612 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi_7 2016-03-23 215 85 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285976 SRS1356753 SRP072220 Col_7 Columbia developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575730 SRX1656611 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi_6 2016-03-23 226 89 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285975 SRS1356754 SRP072220 Col_6 Columbia developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575729 SRX1656610 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi_5 2016-03-23 227 93 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285974 SRS1356755 SRP072220 Col_5 Columbia developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575728 SRX1656609 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi_4 2016-03-23 264 100 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285973 SRS1356756 SRP072220 Col_4 Columbia developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575727 SRX1656608 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi_3 2016-03-23 223 90 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285972 SRS1356757 SRP072220 Col_3 Columbia developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575726 SRX1656607 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi_2 2016-03-23 190 79 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285971 SRS1356758 SRP072220 Col_2 Columbia developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575725 SRX1656606 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi_1 2016-03-23 172 71 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285970 SRS1356759 SRP072220 Col_1 Columbia developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575724 SRX1656605 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi_0 2016-03-23 63 25 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285969 SRS1356760 SRP072220 Col_0 Columbia developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575715 SRX1656604 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Col_1 2016-03-23 251 93 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285968 SRS1356761 SRP072220 Cvi_1 Cvi developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575723 SRX1656622 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Col_9 2016-03-23 316 120 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285986 SRS1356762 SRP072220 Cvi_9 Cvi developing seeds public 0 miRNA-Seq GCA_000001735.1 21 PRJNA315687 SAMN04575722 SRX1656621 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Col_8 2016-03-23 235 90 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285985 SRS1356763 SRP072220 Cvi_8 Cvi developing seeds public 0 miRNA-Seq GCA_000001735.1 22 PRJNA315687 SAMN04575721 SRX1656620 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Col_7 2016-03-23 261 96 Arabidopsis thaliana ILLUMINA 2016-03-23 SRR3285984 SRS1356764 SRP072220 Cvi_7 Cvi developing seeds public 0 ncRNA-Seq 100 PRJNA316991 SAMN04594771 GEO SRX1671761 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 1077 723 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317022 SRS1368934 SRP072689 GSM2102468 Columbia ddm1 pol V mutant ddm1-2 pol V inflorescence public 0 ncRNA-Seq 50 PRJNA316991 SAMN04594768 GEO SRX1671758 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 402 241 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317019 SRS1368935 SRP072689 GSM2102465 Columbia ddm1 pol IV mutant ddm1-2 nrpd1a-3 inflorescence public 0 ncRNA-Seq 100 PRJNA316991 SAMN04594770 GEO SRX1671760 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 804 540 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317021 SRS1368936 SRP072689 GSM2102467 Columbia ddm1 rdr6 mutant ddm1-2 rdr6-15 inflorescence public 0 ncRNA-Seq 50 PRJNA316991 SAMN04594769 GEO SRX1671759 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 886 565 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317020 SRS1368937 SRP072689 GSM2102466 Columbia ddm1 rdr2 mutant ddm1-2 rdr2-1 inflorescence public 0 ncRNA-Seq 100 PRJNA316991 SAMN04594767 GEO SRX1671757 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 1437 961 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317018 SRS1368938 SRP072689 GSM2102464 Columbia ddm1 pol IV mutant ddm1-2 nrpd1a-3 inflorescence public 0 ncRNA-Seq 100 PRJNA316991 SAMN04594765 GEO SRX1671755 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 1039 699 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317016 SRS1368939 SRP072689 GSM2102462 Columbia rdr6 mutant rdr6-15 inflorescence public 0 ncRNA-Seq 50 PRJNA316991 SAMN04594766 GEO SRX1671756 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 341 202 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317017 SRS1368940 SRP072689 GSM2102463 Columbia pol IV rdr6 mutant nrpd1a-3 rdr6-15 inflorescence public 0 ncRNA-Seq 50 PRJNA316991 SAMN04594764 GEO SRX1671754 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 424 248 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317015 SRS1368941 SRP072689 GSM2102461 Columbia dcl3 mutant dcl3-1 inflorescence public 0 ncRNA-Seq 50 PRJNA316991 SAMN04595046 GEO SRX1672089 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 207 124 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317404 SRS1369229 SRP072689 GSM2102972 Columbia ddm1 pol IV rdr6 mutant ddm1-2 nrpd1a-3 rdr6-15 inflorescence public 0 ncRNA-Seq 50 PRJNA316991 SAMN04595045 GEO SRX1672088 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 853 514 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317403 SRS1369230 SRP072689 GSM2102971 Columbia ddm1 pol IV rdr6 mutant ddm1-2 nrpd1a-3 rdr6-15 inflorescence public 0 ncRNA-Seq 80 PRJNA316991 SAMN04595044 GEO SRX1672087 Illumina Genome Analyzer IIx SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 461 291 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317402 SRS1369231 SRP072689 GSM2102970 Columbia ddm1 rdr6 mutant ddm1-2 rdr6-15 inflorescence public 0 ncRNA-Seq 50 PRJNA316991 SAMN04595043 GEO SRX1672086 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 353 209 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317401 SRS1369232 SRP072689 GSM2102969 Columbia ddm1 dcl3 mutant ddm1-2 dcl3-1 inflorescence public 0 ncRNA-Seq 50 PRJNA316991 SAMN04595042 GEO SRX1672085 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 369 214 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317400 SRS1369233 SRP072689 GSM2102968 Columbia ddm1 dcl3 mutant ddm1-2 dcl3-1 inflorescence public 0 ncRNA-Seq 100 PRJNA316991 SAMN04595041 GEO SRX1672084 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 869 580 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317399 SRS1369234 SRP072689 GSM2102967 Columbia ddm1 mutant ddm1-2 inflorescence public 0 ncRNA-Seq 80 PRJNA316991 SAMN04595040 GEO SRX1672083 Illumina Genome Analyzer IIx SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 484 304 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317398 SRS1369235 SRP072689 GSM2102966 Columbia ddm1 mutant ddm1-2 inflorescence public 0 ncRNA-Seq 80 PRJNA316991 SAMN04595039 GEO SRX1672082 Illumina Genome Analyzer IIx SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 277 176 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317397 SRS1369236 SRP072689 GSM2102965 Columbia rdr6 mutant rdr6-15 inflorescence public 0 ncRNA-Seq 100 PRJNA316991 SAMN04595038 GEO SRX1672081 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 898 595 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317396 SRS1369237 SRP072689 GSM2102964 Columbia pol IV mutant nrpd1a-3 inflorescence public 0 ncRNA-Seq 100 PRJNA316991 SAMN04595037 GEO SRX1672080 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 978 655 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317395 SRS1369238 SRP072689 GSM2102963 Columbia wild type wild type Columbia inflorescence public 0 ncRNA-Seq 80 PRJNA316991 SAMN04595036 GEO SRX1672079 Illumina Genome Analyzer IIx SINGLE size fractionation TRANSCRIPTOMIC 2016-03-31 468 297 Arabidopsis thaliana ILLUMINA 2016-07-25 SRR3317394 SRS1369239 SRP072689 GSM2102962 Columbia wild type wild type Columbia inflorescence public 0 miRNA-Seq 51 PRJNA321382 SAMN04992895 GEO SRX1757690 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-12 829 567 Arabidopsis thaliana ILLUMINA 2017-02-13 SRR3499593 SRS1434023 SRP074886 GSM2151216 Col-0 WT 10 day old seedlings public 0 miRNA-Seq 51 PRJNA321382 SAMN04992896 GEO SRX1757691 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-12 761 524 Arabidopsis thaliana ILLUMINA 2017-02-13 SRR3499594 SRS1434024 SRP074886 GSM2151217 Col-0 WT 10 day old seedlings public 0 miRNA-Seq 51 PRJNA321382 SAMN04992897 GEO SRX1757692 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-12 763 520 Arabidopsis thaliana ILLUMINA 2017-02-13 SRR3499595 SRS1434025 SRP074886 GSM2151218 Col-0 parg1-1 10 day old seedlings public 0 miRNA-Seq 51 PRJNA321382 SAMN04992899 GEO SRX1757694 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-12 558 382 Arabidopsis thaliana ILLUMINA 2017-02-13 SRR3499597 SRS1434026 SRP074886 GSM2151220 Col-0 parp1parp2 10 day old seedlings public 0 miRNA-Seq 51 PRJNA321382 SAMN04992900 GEO SRX1757695 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-12 677 465 Arabidopsis thaliana ILLUMINA 2017-02-13 SRR3499598 SRS1434027 SRP074886 GSM2151221 Col-0 parp1parp2 10 day old seedlings public 0 miRNA-Seq 51 PRJNA321382 SAMN04992898 GEO SRX1757693 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-12 852 582 Arabidopsis thaliana ILLUMINA 2017-02-13 SRR3499596 SRS1434028 SRP074886 GSM2151219 Col-0 parg1-1 10 day old seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187938 GEO SRX1808271 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 785 539 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606094 SRS1473059 SRP075884 GSM2181671 Col-0 WT 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187939 GEO SRX1808272 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 632 435 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606095 SRS1473060 SRP075884 GSM2181672 Col-0 WT 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187940 GEO SRX1808273 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 723 492 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606096 SRS1473061 SRP075884 GSM2181673 Col-0 WT 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187941 GEO SRX1808274 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 855 588 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606097 SRS1473062 SRP075884 GSM2181674 Col-0 ago1-27 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187942 GEO SRX1808275 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 644 439 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606098 SRS1473063 SRP075884 GSM2181675 Col-0 ago1-27 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187943 GEO SRX1808276 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 901 623 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606099 SRS1473064 SRP075884 GSM2181676 Col-0 ago1-27 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187944 GEO SRX1808277 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 771 489 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606100 SRS1473065 SRP075884 GSM2181677 Col-0 ago1-36 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187945 GEO SRX1808278 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 800 495 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606101 SRS1473066 SRP075884 GSM2181678 Col-0 ago1-36 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187946 GEO SRX1808279 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 645 403 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606102 SRS1473067 SRP075884 GSM2181679 Col-0 ago1-36 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187947 GEO SRX1808280 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 916 633 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606103 SRS1473068 SRP075884 GSM2181680 Col-0 WT 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187948 GEO SRX1808281 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 836 574 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606104 SRS1473069 SRP075884 GSM2181681 Col-0 WT 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187949 GEO SRX1808282 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 809 559 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606105 SRS1473070 SRP075884 GSM2181682 Col-0 WT 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187950 GEO SRX1808283 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 777 535 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606106 SRS1473071 SRP075884 GSM2181683 Col-0 ago1-27 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187951 GEO SRX1808284 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 675 464 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606107 SRS1473072 SRP075884 GSM2181684 Col-0 ago1-27 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187952 GEO SRX1808285 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 1004 647 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606108 SRS1473073 SRP075884 GSM2181685 Col-0 WT 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187953 GEO SRX1808286 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 991 637 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606109 SRS1473074 SRP075884 GSM2181686 Col-0 WT 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187954 GEO SRX1808287 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 1221 769 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606110 SRS1473075 SRP075884 GSM2181687 Col-0 WT 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187955 GEO SRX1808288 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 654 414 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606111 SRS1473076 SRP075884 GSM2181688 Col-0 WT 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187956 GEO SRX1808289 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 674 434 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606112 SRS1473077 SRP075884 GSM2181689 Col-0 WT 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187957 GEO SRX1808290 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 692 442 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606113 SRS1473078 SRP075884 GSM2181690 Col-0 WT 12-day seedlings public 0 ncRNA-Seq 51 PRJNA323732 SAMN05187958 GEO SRX1808291 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-05-30 274 174 Arabidopsis thaliana ILLUMINA 2016-12-23 SRR3606114 SRS1473079 SRP075884 GSM2181691 Col-0 WT 12-day seedlings public 0 miRNA-Seq 51 PRJNA326408 SAMN05277726 GEO SRX1868687 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 1729 760 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707786 SRS1519474 SRP076861 GSM2209794 wild type Col shoot 4 hour air Small RNAseq shoot public 0 miRNA-Seq 51 PRJNA326408 SAMN05277725 GEO SRX1868686 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 1301 570 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707785 SRS1519475 SRP076861 GSM2209793 wild type Col shoot 4 hour air Small RNAseq shoot public 0 miRNA-Seq 51 PRJNA326408 SAMN05277727 GEO SRX1868688 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 2579 1073 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707787 SRS1519476 SRP076861 GSM2209795 wild type Col shoot 4 hour ethylene Small RNAseq shoot public 0 miRNA-Seq 51 PRJNA326408 SAMN05277698 GEO SRX1868689 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 1961 841 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707788 SRS1519477 SRP076861 GSM2209796 wild type Col shoot 4 hour ethylene Small RNAseq shoot public 0 miRNA-Seq 51 PRJNA326408 SAMN05277702 GEO SRX1868690 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 2945 1245 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707789 SRS1519478 SRP076861 GSM2209797 cbp20 mutant cbp20 shoot 4 hour air Small RNAseq shoot public 0 miRNA-Seq 51 PRJNA326408 SAMN05277704 GEO SRX1868691 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 2117 903 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707790 SRS1519479 SRP076861 GSM2209798 cbp20 mutant cbp20 shoot 4 hour air Small RNAseq shoot public 0 miRNA-Seq 51 PRJNA326408 SAMN05277705 GEO SRX1868692 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 2227 929 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707791 SRS1519480 SRP076861 GSM2209799 cbp20 mutant cbp20 shoot 4 hour ethylene Small RNAseq shoot public 0 miRNA-Seq 51 PRJNA326408 SAMN05277706 GEO SRX1868693 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 1786 770 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707792 SRS1519481 SRP076861 GSM2209800 cbp20 mutant cbp20 shoot 4 hour ethylene Small RNAseq shoot public 0 miRNA-Seq 35 PRJNA326408 SAMN05277699 GEO SRX1868694 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 1977 825 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707793 SRS1519482 SRP076861 GSM2209801 wild type Col root 4 hour air Small RNAseq root public 0 miRNA-Seq 35 PRJNA326408 SAMN05277700 GEO SRX1868695 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 2065 861 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707794 SRS1519483 SRP076861 GSM2209802 wild type Col root 4 hour air Small RNAseq root public 0 miRNA-Seq 35 PRJNA326408 SAMN05277701 GEO SRX1868696 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 2312 964 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707795 SRS1519484 SRP076861 GSM2209803 wild type Col root 4 hour ethylene Small RNAseq root public 0 miRNA-Seq 35 PRJNA326408 SAMN05277707 GEO SRX1868697 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 1953 819 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707796 SRS1519485 SRP076861 GSM2209804 wild type Col root 4 hour ethylene Small RNAseq root public 0 miRNA-Seq 35 PRJNA326408 SAMN05277708 GEO SRX1868698 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 2687 1138 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707797 SRS1519486 SRP076861 GSM2209805 cbp20 mutant cbp20 root 4 hour air Small RNAseq root public 0 miRNA-Seq 35 PRJNA326408 SAMN05277709 GEO SRX1868699 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 2512 1048 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707798 SRS1519487 SRP076861 GSM2209806 cbp20 mutant cbp20 root 4 hour air Small RNAseq root public 0 miRNA-Seq 35 PRJNA326408 SAMN05277710 GEO SRX1868700 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 2122 881 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707799 SRS1519489 SRP076861 GSM2209807 cbp20 mutant cbp20 root 4 hour ethylene Small RNAseq root public 0 miRNA-Seq 35 PRJNA326408 SAMN05277711 GEO SRX1868701 Illumina HiSeq 4000 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-21 1835 763 Arabidopsis thaliana ILLUMINA 2016-10-31 SRR3707800 SRS1519490 SRP076861 GSM2209808 cbp20 mutant cbp20 root 4 hour ethylene Small RNAseq root public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300518 GEO SRX1881703 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 672 447 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724580 SRS1528170 SRP077467 GSM2218931 14 days WT Col_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300518 GEO SRX1881703 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 660 435 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724581 SRS1528170 SRP077467 GSM2218931 14 days WT Col_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300519 GEO SRX1881704 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 744 492 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724582 SRS1528171 SRP077467 GSM2218932 14 days WT Col_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300519 GEO SRX1881704 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 731 479 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724583 SRS1528171 SRP077467 GSM2218932 14 days WT Col_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300520 GEO SRX1881705 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 710 474 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724584 SRS1528172 SRP077467 GSM2218933 14 days nrpd1 mutant nrpd1_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300520 GEO SRX1881705 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 700 464 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724585 SRS1528172 SRP077467 GSM2218933 14 days nrpd1 mutant nrpd1_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300521 GEO SRX1881706 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 726 486 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724586 SRS1528173 SRP077467 GSM2218934 14 days nrpd1 mutant nrpd1_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300521 GEO SRX1881706 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 714 473 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724587 SRS1528173 SRP077467 GSM2218934 14 days nrpd1 mutant nrpd1_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300522 GEO SRX1881707 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 689 457 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724588 SRS1528174 SRP077467 GSM2218935 14 days ros1 mutant ros1_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300522 GEO SRX1881707 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 676 444 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724589 SRS1528174 SRP077467 GSM2218935 14 days ros1 mutant ros1_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300523 GEO SRX1881708 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 721 478 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724590 SRS1528175 SRP077467 GSM2218936 14 days ros1 mutant ros1_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300523 GEO SRX1881708 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 709 466 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724591 SRS1528175 SRP077467 GSM2218936 14 days ros1 mutant ros1_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300524 GEO SRX1881709 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 845 563 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724592 SRS1528176 SRP077467 GSM2218937 14 days ros1/nrpd1 double mutant ros1nrpd1_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300524 GEO SRX1881709 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 829 547 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724593 SRS1528176 SRP077467 GSM2218937 14 days ros1/nrpd1 double mutant ros1nrpd1_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300525 GEO SRX1881710 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 792 525 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724594 SRS1528177 SRP077467 GSM2218938 14 days ros1/nrpd1 double mutant ros1nrpd1_sRNA-Seq seedlings public 0 ncRNA-Seq 51 PRJNA327041 SAMN05300525 GEO SRX1881710 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-06-28 778 512 Arabidopsis thaliana ILLUMINA 2016-11-01 SRR3724595 SRS1528177 SRP077467 GSM2218938 14 days ros1/nrpd1 double mutant ros1nrpd1_sRNA-Seq seedlings public 0 miRNA-Seq 50 PRJNA330596 SAMN05417760 NANJING UNIVERSITY SRX1961463 Illumina HiSeq 2500 SINGLE RANDOM PCR OTHER 2016-10-17 630 278 Arabidopsis thaliana ILLUMINA 2016-11-07 SRR3932117 SRS1571378 SRP078966 miRNA WT Col-0 WHOLE SEEDLING public 0 miRNA-Seq 50 PRJNA330596 SAMN05417761 NANJING UNIVERSITY SRX1979084 Illumina HiSeq 2500 SINGLE RANDOM TRANSCRIPTOMIC 2016-10-17 595 262 Arabidopsis thaliana ILLUMINA 2016-11-07 SRR3954849 SRS1586606 SRP078966 miRNA cyp71 Col-0 WHOLE SEEDLING public 0 miRNA-Seq 50 PRJNA336060 SAMN05503883 GEO SRX1993701 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-01 996 519 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR3992484 SRS1596408 SRP080772 GSM2257315 4 weeks Columbia wildtype leaves leaves public 0 miRNA-Seq 50 PRJNA336060 SAMN05503882 GEO SRX1993702 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-01 1154 629 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR3992485 SRS1596409 SRP080772 GSM2257316 4 weeks Columbia wildtype leaves leaves public 0 miRNA-Seq 50 PRJNA336060 SAMN05503881 GEO SRX1993703 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-01 1120 628 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR3992486 SRS1596410 SRP080772 GSM2257317 4 weeks Columbia wildtype leaves leaves public 0 miRNA-Seq 50 PRJNA336060 SAMN05503880 GEO SRX1993704 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-01 1081 556 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR3992487 SRS1596411 SRP080772 GSM2257318 4 weeks Columbia wildtype leaves leaves public 0 miRNA-Seq 50 PRJNA336060 SAMN05503879 GEO SRX1993705 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-01 1077 535 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR3992488 SRS1596412 SRP080772 GSM2257319 4 weeks Columbia wildtype leaves leaves public 0 miRNA-Seq 50 PRJNA336060 SAMN05503878 GEO SRX1993706 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-01 1080 558 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR3992489 SRS1596413 SRP080772 GSM2257320 4 weeks Columbia wildtype leaves leaves public 0 miRNA-Seq 50 PRJNA336060 SAMN05503877 GEO SRX1993707 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-01 996 462 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR3992490 SRS1596414 SRP080772 GSM2257321 4 weeks Columbia DCL1 homozygous mutant leaves leaves public 0 miRNA-Seq 50 PRJNA336060 SAMN05503876 GEO SRX1993708 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-01 1091 539 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR3992491 SRS1596415 SRP080772 GSM2257322 4 weeks Columbia DCL1 homozygous mutant leaves leaves public 0 miRNA-Seq 50 PRJNA336060 SAMN05503875 GEO SRX1993709 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-01 1260 659 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR3992492 SRS1596416 SRP080772 GSM2257323 4 weeks Columbia DCL1 homozygous mutant leaves leaves public 0 miRNA-Seq 50 PRJNA336060 SAMN05503874 GEO SRX1993710 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-01 1092 583 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR3992493 SRS1596417 SRP080772 GSM2257324 4 weeks Columbia DCL1 homozygous mutant leaves leaves public 0 miRNA-Seq 50 PRJNA336060 SAMN05503873 GEO SRX1993711 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-01 1107 563 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR3992494 SRS1596418 SRP080772 GSM2257325 4 weeks Columbia DCL1 homozygous mutant leaves leaves public 0 miRNA-Seq 50 PRJNA336060 SAMN05503872 GEO SRX1993712 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-01 958 520 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR3992495 SRS1596419 SRP080772 GSM2257326 4 weeks Columbia DCL1 homozygous mutant leaves leaves public 0 miRNA-Seq 50 PRJNA338792 SAMN05570566 GEO SRX2018107 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 1662 1024 Arabidopsis ILLUMINA 2016-08-30 SRR4026068 SRS1614050 SRP081550 GSM2277058 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570565 GEO SRX2018108 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 1770 1067 Arabidopsis ILLUMINA 2016-08-30 SRR4026069 SRS1614051 SRP081550 GSM2277059 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570567 GEO SRX2018106 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 1858 1152 Arabidopsis ILLUMINA 2016-08-30 SRR4026067 SRS1614052 SRP081550 GSM2277057 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570562 GEO SRX2018111 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 776 480 Arabidopsis ILLUMINA 2016-08-30 SRR4026072 SRS1614053 SRP081550 GSM2277062 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570564 GEO SRX2018109 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 1950 1195 Arabidopsis ILLUMINA 2016-08-30 SRR4026070 SRS1614054 SRP081550 GSM2277060 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570563 GEO SRX2018110 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 781 481 Arabidopsis ILLUMINA 2016-08-30 SRR4026071 SRS1614055 SRP081550 GSM2277061 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570556 GEO SRX2018112 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 874 538 Arabidopsis ILLUMINA 2016-08-30 SRR4026073 SRS1614056 SRP081550 GSM2277063 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570561 GEO SRX2018113 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 915 564 Arabidopsis ILLUMINA 2016-08-30 SRR4026074 SRS1614057 SRP081550 GSM2277064 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570560 GEO SRX2018114 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 800 488 Arabidopsis ILLUMINA 2016-08-30 SRR4026075 SRS1614058 SRP081550 GSM2277065 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570559 GEO SRX2018115 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 908 548 Arabidopsis ILLUMINA 2016-08-30 SRR4026076 SRS1614059 SRP081550 GSM2277066 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570557 GEO SRX2018117 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 942 582 Arabidopsis ILLUMINA 2016-08-30 SRR4026078 SRS1614060 SRP081550 GSM2277068 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570558 GEO SRX2018116 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 770 475 Arabidopsis ILLUMINA 2016-08-30 SRR4026077 SRS1614061 SRP081550 GSM2277067 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570554 GEO SRX2018118 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 730 454 Arabidopsis ILLUMINA 2016-08-30 SRR4026079 SRS1614062 SRP081550 GSM2277069 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570553 GEO SRX2018119 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 766 473 Arabidopsis ILLUMINA 2016-08-30 SRR4026080 SRS1614063 SRP081550 GSM2277070 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570552 GEO SRX2018121 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 775 481 Arabidopsis ILLUMINA 2016-08-30 SRR4026082 SRS1614064 SRP081550 GSM2277072 immature infloresence immature infloresence public 0 miRNA-Seq 50 PRJNA338792 SAMN05570555 GEO SRX2018120 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-08-12 774 470 Arabidopsis ILLUMINA 2016-08-30 SRR4026081 SRS1614068 SRP081550 GSM2277071 immature infloresence immature infloresence public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726939 GEO SRX2105568 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 579 328 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124967 SRS1666166 SRP084344 GSM2301576 WT Col-0 WT no UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726938 GEO SRX2105569 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 558 319 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124968 SRS1666167 SRP084344 GSM2301577 WT Col-0 WT no UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726937 GEO SRX2105570 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 734 421 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124969 SRS1666168 SRP084344 GSM2301578 WT Col-0 WT UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726952 GEO SRX2105571 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 550 317 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124970 SRS1666169 SRP084344 GSM2301579 WT Col-0 WT UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726951 GEO SRX2105572 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 705 432 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124971 SRS1666170 SRP084344 GSM2301580 WT Col-0 WT UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726950 GEO SRX2105573 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 610 368 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124972 SRS1666171 SRP084344 GSM2301581 WT Col-0 WT UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726949 GEO SRX2105574 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 559 360 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124973 SRS1666172 SRP084344 GSM2301582 nrpd1a nrpd1a no UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726948 GEO SRX2105575 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 729 413 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124974 SRS1666173 SRP084344 GSM2301583 nrpd1a nrpd1a no UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726947 GEO SRX2105576 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 679 387 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124975 SRS1666174 SRP084344 GSM2301584 nrpd1a nrpd1a UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726946 GEO SRX2105577 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 744 425 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124976 SRS1666175 SRP084344 GSM2301585 nrpd1a nrpd1a UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726945 GEO SRX2105578 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 1449 1034 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124977 SRS1666176 SRP084344 GSM2301586 DDB2-FLAG Input time point 0 no UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726944 GEO SRX2105579 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 1067 727 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124978 SRS1666177 SRP084344 GSM2301587 DDB2-FLAG RIP AGO1 time point 0 no UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726943 GEO SRX2105580 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 1220 866 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124979 SRS1666178 SRP084344 GSM2301588 DDB2-FLAG RIP DDB2 time point 0 no UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726942 GEO SRX2105581 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 1093 776 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124980 SRS1666179 SRP084344 GSM2301589 DDB2-FLAG Input time point 15 min after UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726941 GEO SRX2105582 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 1502 1025 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124981 SRS1666180 SRP084344 GSM2301590 DDB2-FLAG RIP AGO1 time point 15 min after UV seedlings public 0 ncRNA-Seq 50 PRJNA341692 SAMN05726940 GEO SRX2105583 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-02 1114 799 Arabidopsis thaliana ILLUMINA 2017-03-01 SRR4124982 SRS1666181 SRP084344 GSM2301591 DDB2-FLAG RIP DDB2 time point 15 min after UV seedlings public 0 OTHER 21 PRJNA342518 SAMN05761712 SRX2156549 Illumina HiSeq 2500 SINGLE size fractionation OTHER At-AGO1 associated Vd-sRNA 2016-09-12 1158 713 Arabidopsis thaliana ILLUMINA 2016-09-17 SRR4235250 SRS1686512 SRP088575 At-AGO1 IP from Verticillium dahliae infected Arabidopsis 2-3 weeks Col-0 root and leave public 0 OTHER 22 PRJNA342518 SAMN05761713 SRX2156550 Illumina HiSeq 2500 SINGLE size fractionation OTHER At-AGO2 associated Vd-sRNA 2016-09-12 1379 933 Arabidopsis thaliana ILLUMINA 2016-09-17 SRR4235251 SRS1686513 SRP088575 At-AGO2 IP from Verticillium dahliae infected Arabidopsis 2-3 weeks Col-0 root and leave public 0 miRNA-Seq 23 PRJNA344441 SAMN05823559 GEO SRX2190823 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 279 430 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295721 SRS1713351 SRP090456 GSM2327936 Wassilewskija wild type wild type_inflorescence Inflorescence public 0 miRNA-Seq 23 PRJNA344441 SAMN05823558 GEO SRX2190824 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 262 403 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295722 SRS1713352 SRP090456 GSM2327937 Wassilewskija wild type wild type_inflorescence Inflorescence public 0 miRNA-Seq 24 PRJNA344441 SAMN05823557 GEO SRX2190825 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 230 351 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295723 SRS1713353 SRP090456 GSM2327938 Wassilewskija wild type wild type_inflorescence Inflorescence public 0 miRNA-Seq 24 PRJNA344441 SAMN05823555 GEO SRX2190827 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 418 634 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295725 SRS1713354 SRP090456 GSM2327940 Wassilewskija ago4-4 ago4-4_inflorescence Inflorescence public 0 miRNA-Seq 25 PRJNA344441 SAMN05823554 GEO SRX2190828 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 438 640 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295726 SRS1713355 SRP090456 GSM2327941 Wassilewskija ago4-4 ago4-4_inflorescence Inflorescence public 0 miRNA-Seq 23 PRJNA344441 SAMN05823575 GEO SRX2190829 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 313 484 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295727 SRS1713356 SRP090456 GSM2327942 Col-0/Ws ago4-4/6-2/9-1 ago4-4/6-2/9-1_inflorescence Inflorescence public 0 miRNA-Seq 23 PRJNA344441 SAMN05823574 GEO SRX2190830 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 316 487 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295728 SRS1713357 SRP090456 GSM2327943 Col-0/Ws ago4-4/6-2/9-1 ago4-4/6-2/9-1_inflorescence Inflorescence public 0 miRNA-Seq 24 PRJNA344441 SAMN05823556 GEO SRX2190826 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 463 707 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295724 SRS1713358 SRP090456 GSM2327939 Wassilewskija ago4-4 ago4-4_inflorescence Inflorescence public 0 miRNA-Seq 23 PRJNA344441 SAMN05823573 GEO SRX2190831 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 412 632 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295729 SRS1713359 SRP090456 GSM2327944 Col-0/Ws ago4-4/6-2/9-1 ago4-4/6-2/9-1_inflorescence Inflorescence public 0 miRNA-Seq 24 PRJNA344441 SAMN05823571 GEO SRX2190833 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 288 434 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295731 SRS1713360 SRP090456 GSM2327946 Wassilewskija ago4-4/wtAGO4 ago4-4/wtAGO4_inflorescence Inflorescence public 0 miRNA-Seq 24 PRJNA344441 SAMN05823569 GEO SRX2190835 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 292 437 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295733 SRS1713361 SRP090456 GSM2327948 Wassilewskija ago4-4/AGO4-D742A ago4-4/AGO4-D742A_inflorescence Inflorescence public 0 miRNA-Seq 24 PRJNA344441 SAMN05823570 GEO SRX2190834 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 281 420 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295732 SRS1713362 SRP090456 GSM2327947 Wassilewskija ago4-4/wtAGO4 ago4-4/wtAGO4_inflorescence Inflorescence public 0 miRNA-Seq 24 PRJNA344441 SAMN05823572 GEO SRX2190832 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 243 363 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295730 SRS1713363 SRP090456 GSM2327945 Wassilewskija ago4-4/wtAGO4 ago4-4/wtAGO4_inflorescence Inflorescence public 0 miRNA-Seq 24 PRJNA344441 SAMN05823568 GEO SRX2190836 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 335 499 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295734 SRS1713364 SRP090456 GSM2327949 Wassilewskija ago4-4/AGO4-D742A ago4-4/AGO4-D742A_inflorescence Inflorescence public 0 miRNA-Seq 24 PRJNA344441 SAMN05823567 GEO SRX2190837 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 251 377 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295735 SRS1713365 SRP090456 GSM2327950 Wassilewskija ago4-4/AGO4-D742A ago4-4/AGO4-D742A_inflorescence Inflorescence public 0 miRNA-Seq 23 PRJNA344441 SAMN05823566 GEO SRX2190838 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 349 531 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295736 SRS1713366 SRP090456 GSM2327951 Col-0/Ws ago4-4/6-2/9-1/wtAGO4 ago4-4/6-2/9-1/wtAGO4_inflorescence Inflorescence public 0 miRNA-Seq 24 PRJNA344441 SAMN05823565 GEO SRX2190839 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 371 557 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295737 SRS1713367 SRP090456 GSM2327952 Col-0/Ws ago4-4/6-2/9-1/wtAGO4 ago4-4/6-2/9-1/wtAGO4_inflorescence Inflorescence public 0 miRNA-Seq 24 PRJNA344441 SAMN05823564 GEO SRX2190840 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 238 357 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295738 SRS1713368 SRP090456 GSM2327953 Col-0/Ws ago4-4/6-2/9-1/wtAGO4 ago4-4/6-2/9-1/wtAGO4_inflorescence Inflorescence public 0 miRNA-Seq 23 PRJNA344441 SAMN05823562 GEO SRX2190842 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 209 315 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295740 SRS1713369 SRP090456 GSM2327955 Col-0/Ws ago4-4/6-2/9-1/AGO4-D742A ago4-4/6-2/9-1/AGO4-D742A_inflorescence Inflorescence public 0 miRNA-Seq 24 PRJNA344441 SAMN05823563 GEO SRX2190841 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 359 545 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295739 SRS1713370 SRP090456 GSM2327954 Col-0/Ws ago4-4/6-2/9-1/AGO4-D742A ago4-4/6-2/9-1/AGO4-D742A_inflorescence Inflorescence public 0 miRNA-Seq 24 PRJNA344441 SAMN05823561 GEO SRX2190843 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 173 262 Arabidopsis thaliana ILLUMINA 2017-05-29 SRR4295741 SRS1713371 SRP090456 GSM2327956 Col-0/Ws ago4-4/6-2/9-1/AGO4-D742A ago4-4/6-2/9-1/AGO4-D742A_inflorescence Inflorescence public 0 ncRNA-Seq 76 PRJNA344469 SAMN05824338 GEO SRX2191351 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 2602 1043 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR4296249 SRS1713879 SRP090465 GSM2328652 13 days old WT 13-day-old seedlings, without AGO1-IP public 0 ncRNA-Seq 76 PRJNA344469 SAMN05824337 GEO SRX2191352 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 2989 1165 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR4296250 SRS1713880 SRP090465 GSM2328653 13 days old AGO10 overexpression 13-day-old seedlings, without AGO1-IP public 0 ncRNA-Seq 76 PRJNA344469 SAMN05824336 GEO SRX2191353 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 2580 1028 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR4296251 SRS1713881 SRP090465 GSM2328654 13 days old AGO10 overexpression 13-day-old seedlings, without AGO1-IP public 0 ncRNA-Seq 76 PRJNA344469 SAMN05824335 GEO SRX2191354 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 2716 1058 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR4296252 SRS1713882 SRP090465 GSM2328655 13 days old AGO10 overexpression 13-day-old seedlings, without AGO1-IP public 0 ncRNA-Seq 76 PRJNA344469 SAMN05824334 GEO SRX2191355 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 2528 1005 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR4296253 SRS1713883 SRP090465 GSM2328656 13 days old AGO10 overexpression 13-day-old seedlings, without AGO1-IP public 0 ncRNA-Seq 76 PRJNA344474 SAMN05824345 GEO SRX2191362 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 1851 725 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR4296260 SRS1713890 SRP090467 GSM2328675 13 days old His-FLAG-AGO10 transgenic 13-day-old seedlings, with AGO1-IP public 0 ncRNA-Seq 76 PRJNA344474 SAMN05824386 GEO SRX2191363 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 2685 1049 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR4296261 SRS1713891 SRP090467 GSM2328676 13 days old His-FLAG-AGO10 transgenic 13-day-old seedlings, with AGO1-IP public 0 ncRNA-Seq 76 PRJNA344474 SAMN05824384 GEO SRX2191364 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 2170 872 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR4296262 SRS1713892 SRP090467 GSM2328677 13 days old His-FLAG-AGO10 transgenic 13-day-old seedlings, with AGO1-IP public 0 ncRNA-Seq 76 PRJNA344474 SAMN05824381 GEO SRX2191365 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 1511 611 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR4296263 SRS1713893 SRP090467 GSM2328678 13 days old His-FLAG-AGO10 transgenic 13-day-old seedlings, with AGO1-IP public 0 ncRNA-Seq 76 PRJNA344474 SAMN05824377 GEO SRX2191366 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 659 257 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR4296264 SRS1713894 SRP090467 GSM2328679 13 days old His-FLAG-AGO10 transgenic 13-day-old seedlings, with AGO10-IP public 0 ncRNA-Seq 76 PRJNA344474 SAMN05824374 GEO SRX2191367 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 975 384 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR4296265 SRS1713895 SRP090467 GSM2328680 13 days old His-FLAG-AGO10 transgenic 13-day-old seedlings, with AGO10-IP public 0 ncRNA-Seq 76 PRJNA344474 SAMN05824371 GEO SRX2191368 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 2322 917 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR4296266 SRS1713896 SRP090467 GSM2328681 13 days old His-FLAG-AGO10 transgenic 13-day-old seedlings, with AGO10-IP public 0 ncRNA-Seq 76 PRJNA344474 SAMN05824368 GEO SRX2191369 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-09-26 2317 914 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR4296267 SRS1713897 SRP090467 GSM2328682 13 days old His-FLAG-AGO10 transgenic 13-day-old seedlings, with AGO10-IP public 0 ncRNA-Seq 50 PRJNA269310 SAMN05935557 GEO SRX2265341 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-10-24 562 376 Arabidopsis thaliana ILLUMINA 2017-02-23 SRR4446498 SRS1757055 SRP050570 GSM2358420 Col-0 wild type pollen mature pollen public 0 ncRNA-Seq 50 PRJNA269310 SAMN05935556 GEO SRX2265342 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-10-24 902 611 Arabidopsis thaliana ILLUMINA 2017-02-23 SRR4446499 SRS1757056 SRP050570 GSM2358421 Col-0 wild type pollen mature pollen public 0 ncRNA-Seq 50 PRJNA269310 SAMN05935555 GEO SRX2265343 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-10-24 921 625 Arabidopsis thaliana ILLUMINA 2017-02-23 SRR4446500 SRS1757057 SRP050570 GSM2358422 Col-0 wild type pollen mature pollen public 0 ncRNA-Seq 22 PRJNA352201 SAMN05967575 GEO SRX2319997 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-11-04 233 169 Arabidopsis thaliana ILLUMINA 2016-11-04 SRR4831941 SRS1776215 SRP092447 GSM2371466 WT seedlings seedlings public 0 ncRNA-Seq 22 PRJNA352201 SAMN05967573 GEO SRX2319999 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-11-04 245 177 Arabidopsis thaliana ILLUMINA 2016-11-04 SRR4831943 SRS1776217 SRP092447 GSM2371468 sac3b-3 (SALK 065672) seedlings seedlings public 0 ncRNA-Seq 22 PRJNA352201 SAMN05967574 GEO SRX2319998 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-11-04 248 180 Arabidopsis thaliana ILLUMINA 2016-11-04 SRR4831942 SRS1776218 SRP092447 GSM2371467 sac3b-7 (SALK 111245) seedlings seedlings public 0 OTHER 50 PRJNA353359 SAMN06017513 SRX2356684 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC sRNA_inf_5dpi 2016-11-17 1627 664 Arabidopsis thaliana ILLUMINA 2017-03-02 SRR5031488 SRS1805702 SRP093501 sRNA_inf_5dpi 15 days Col-0 root public 0 OTHER 50 PRJNA353359 SAMN06017515 SRX2356719 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC sRNA_inf_10dpi 2016-11-17 1935 796 Arabidopsis thaliana ILLUMINA 2017-03-02 SRR5031522 SRS1805735 SRP093501 sRNA_inf_10dpi 20 days Col-0 root public 0 OTHER 50 PRJNA353359 SAMN06017512 SRX2356720 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC sRNA_ctrl_5dpi 2016-11-17 1812 728 Arabidopsis thaliana ILLUMINA 2017-03-02 SRR5031523 SRS1805736 SRP093501 sRNA_ctrl_5dpi 15 days Col-0 root public 0 OTHER 50 PRJNA353359 SAMN06017514 SRX2356727 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC sRNA_ctrl_10dpi 2016-11-17 1727 700 Arabidopsis thaliana ILLUMINA 2017-03-02 SRR5031530 SRS1805742 SRP093501 sRNA_ctrl_10dpi 20 days Col-0 root public 0 miRNA-Seq 51 PRJNA355875 SAMN06094263 GEO SRX2388749 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-02 352 207 Arabidopsis thaliana ILLUMINA 2017-04-18 SRR5068868 SRS1830634 SRP094441 GSM2412286 wildtype Leaves, WT leaves public 0 miRNA-Seq 51 PRJNA355875 SAMN06094262 GEO SRX2388750 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-02 231 139 Arabidopsis thaliana ILLUMINA 2017-04-18 SRR5068869 SRS1830636 SRP094441 GSM2412287 wildtype Leaves, WT leaves public 0 miRNA-Seq 51 PRJNA355875 SAMN06094261 GEO SRX2388751 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-02 263 161 Arabidopsis thaliana ILLUMINA 2017-04-18 SRR5068870 SRS1830638 SRP094441 GSM2412288 wildtype Leaves, WT leaves public 0 miRNA-Seq 51 PRJNA355875 SAMN06094260 GEO SRX2388752 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-02 654 395 Arabidopsis thaliana ILLUMINA 2017-04-18 SRR5068871 SRS1830639 SRP094441 GSM2412289 DCL1 knockdown Leaves, DCL1 knockdown leaves public 0 miRNA-Seq 51 PRJNA355875 SAMN06094259 GEO SRX2388753 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-02 577 354 Arabidopsis thaliana ILLUMINA 2017-04-18 SRR5068872 SRS1830640 SRP094441 GSM2412290 DCL1 knockdown Leaves, DCL1 knockdown leaves public 0 miRNA-Seq 51 PRJNA355875 SAMN06094258 GEO SRX2388754 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-02 788 470 Arabidopsis thaliana ILLUMINA 2017-04-18 SRR5068873 SRS1830641 SRP094441 GSM2412291 DCL1 knockdown Leaves, DCL1 knockdown leaves public 0 ncRNA-Seq 51 PRJNA356639 SAMN06118019 GEO SRX2403347 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-07 1472 1031 Arabidopsis thaliana ILLUMINA 2017-03-09 SRR5085886 SRS1842796 SRP094722 GSM2419231 wild type flowers and flower buds flowers and flower buds public 0 ncRNA-Seq 51 PRJNA356639 SAMN06118020 GEO SRX2403348 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-07 1446 1021 Arabidopsis thaliana ILLUMINA 2017-03-09 SRR5085887 SRS1842797 SRP094722 GSM2419232 stv-1 flowers and flower buds flowers and flower buds public 0 ncRNA-Seq 51 PRJNA356639 SAMN06118017 GEO SRX2403349 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-07 1517 1059 Arabidopsis thaliana ILLUMINA 2017-03-09 SRR5085888 SRS1842798 SRP094722 GSM2419233 wild type flowers and flower buds flowers and flower buds public 0 ncRNA-Seq 51 PRJNA356639 SAMN06118018 GEO SRX2403350 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-07 1419 995 Arabidopsis thaliana ILLUMINA 2017-03-09 SRR5085889 SRS1842799 SRP094722 GSM2419234 stv-1 flowers and flower buds flowers and flower buds public 0 ncRNA-Seq 50 PRJNA357198 SAMN06134711 GEO SRX2417122 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-13 1109 365 Arabidopsis thaliana ILLUMINA 2016-12-15 SRR5100580 SRS1854477 SRP095004 GSM2425574 Columbia wild type Flowers flower public 0 ncRNA-Seq 50 PRJNA357198 SAMN06134710 GEO SRX2417123 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-13 1306 427 Arabidopsis thaliana ILLUMINA 2016-12-15 SRR5100581 SRS1854478 SRP095004 GSM2425575 Columbia drb7.2 -/- Flowers flower public 0 ncRNA-Seq 50 PRJNA357198 SAMN06134713 GEO SRX2417124 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-13 1019 343 Arabidopsis thaliana ILLUMINA 2016-12-15 SRR5100582 SRS1854479 SRP095004 GSM2425576 Columbia wild type Flowers flower public 0 ncRNA-Seq 50 PRJNA357198 SAMN06134712 GEO SRX2417125 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-13 926 316 Arabidopsis thaliana ILLUMINA 2016-12-15 SRR5100583 SRS1854480 SRP095004 GSM2425577 Columbia drb7.2 -/- Flowers flower public 0 ncRNA-Seq 76 PRJNA344474 SAMN06189253 GEO SRX2448644 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-28 400 156 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR5133950 SRS1882056 SRP090467 GSM2441445 13 days old His-FLAG-AGO10 transgenic 13-day-old seedlings, with AGO1-IP public 0 ncRNA-Seq 76 PRJNA344474 SAMN06189252 GEO SRX2448645 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-28 605 234 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR5133951 SRS1882057 SRP090467 GSM2441446 13 days old His-FLAG-AGO10 transgenic 13-day-old seedlings, with AGO1-IP public 0 ncRNA-Seq 76 PRJNA344474 SAMN06189251 GEO SRX2448646 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-28 743 291 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR5133952 SRS1882058 SRP090467 GSM2441447 13 days old His-FLAG-AGO10 transgenic 13-day-old seedlings, with AGO10-IP public 0 ncRNA-Seq 76 PRJNA344474 SAMN06189250 GEO SRX2448647 NextSeq 500 SINGLE size fractionation TRANSCRIPTOMIC 2016-12-28 554 216 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR5133953 SRS1882059 SRP090467 GSM2441448 13 days old His-FLAG-AGO10 transgenic 13-day-old seedlings, with AGO10-IP public 0 OTHER 36 PRJNA138735 SAMN00259639 GEO SRX057524 Illumina Genome Analyzer SINGLE other TRANSCRIPTOMIC GSM709567: WT_col_ovules 2014-05-30 181 143 Arabidopsis thaliana ILLUMINA 2011-05-17 SRR185818 SRS188726 SRP006400 GSM709567 Col(0) mature ovules public 0 miRNA-Seq GCF_000001735.2 22 PRJNA360434 SAMN06206081 SRX2469477 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi-0_13 2017-01-06 193 75 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR5151392 SRS1899653 SRP096194 Cvi_13 Cvi developing seeds public 0 miRNA-Seq GCF_000001735.2 22 PRJNA360434 SAMN06206082 SRX2469476 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi-0_14 2017-01-06 180 74 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR5151391 SRS1899654 SRP096194 Cvi_14 Cvi developing seeds public 0 miRNA-Seq GCF_000001735.2 22 PRJNA360434 SAMN06206080 SRX2469474 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi-0_12 2017-01-06 270 110 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR5151389 SRS1899655 SRP096194 Cvi_12 Cvi developing seeds public 0 miRNA-Seq GCF_000001735.2 22 PRJNA360434 SAMN06206078 SRX2469475 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi-0_10 2017-01-06 210 85 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR5151390 SRS1899656 SRP096194 Cvi_10 Cvi developing seeds public 0 miRNA-Seq GCF_000001735.2 22 PRJNA360434 SAMN06206079 SRX2469473 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC Cvi-0_11 2017-01-06 256 101 Arabidopsis thaliana ILLUMINA 2017-01-11 SRR5151388 SRS1899657 SRP096194 Cvi_11 Cvi developing seeds public 0 ncRNA-Seq 61 PRJNA360412 SAMN06210188 GEO SRX2469198 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-01-06 639 415 Arabidopsis thaliana ILLUMINA 2017-04-14 SRR5151108 SRS1901488 SRP096188 GSM2449065 3-week-old WT rosette leaves rosette leaves public 0 ncRNA-Seq 61 PRJNA360412 SAMN06210188 GEO SRX2469198 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-01-06 682 442 Arabidopsis thaliana ILLUMINA 2017-04-14 SRR5151109 SRS1901488 SRP096188 GSM2449065 3-week-old WT rosette leaves rosette leaves public 0 ncRNA-Seq 61 PRJNA360412 SAMN06210193 GEO SRX2469199 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-01-06 650 419 Arabidopsis thaliana ILLUMINA 2017-04-14 SRR5151110 SRS1901489 SRP096188 GSM2449066 3-week-old WT rosette leaves rosette leaves public 0 ncRNA-Seq 61 PRJNA360412 SAMN06210193 GEO SRX2469199 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-01-06 699 451 Arabidopsis thaliana ILLUMINA 2017-04-14 SRR5151111 SRS1901489 SRP096188 GSM2449066 3-week-old WT rosette leaves rosette leaves public 0 ncRNA-Seq 61 PRJNA360412 SAMN06210192 GEO SRX2469200 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-01-06 755 489 Arabidopsis thaliana ILLUMINA 2017-04-14 SRR5151112 SRS1901490 SRP096188 GSM2449067 3-week-old hyl1-2 mutant rosette leaves rosette leaves public 0 ncRNA-Seq 61 PRJNA360412 SAMN06210192 GEO SRX2469200 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-01-06 780 503 Arabidopsis thaliana ILLUMINA 2017-04-14 SRR5151113 SRS1901490 SRP096188 GSM2449067 3-week-old hyl1-2 mutant rosette leaves rosette leaves public 0 ncRNA-Seq 61 PRJNA360412 SAMN06210191 GEO SRX2469201 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-01-06 720 463 Arabidopsis thaliana ILLUMINA 2017-04-14 SRR5151114 SRS1901491 SRP096188 GSM2449068 3-week-old hyl1-2 mutant rosette leaves rosette leaves public 0 ncRNA-Seq 61 PRJNA360412 SAMN06210191 GEO SRX2469201 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-01-06 757 486 Arabidopsis thaliana ILLUMINA 2017-04-14 SRR5151115 SRS1901491 SRP096188 GSM2449068 3-week-old hyl1-2 mutant rosette leaves rosette leaves public 0 ncRNA-Seq 61 PRJNA360412 SAMN06210190 GEO SRX2469202 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-01-06 682 442 Arabidopsis thaliana ILLUMINA 2017-04-14 SRR5151116 SRS1901492 SRP096188 GSM2449069 3-week-old snrk2.2/3/6 mutant rosette leaves rosette leaves public 0 ncRNA-Seq 61 PRJNA360412 SAMN06210190 GEO SRX2469202 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-01-06 728 471 Arabidopsis thaliana ILLUMINA 2017-04-14 SRR5151117 SRS1901492 SRP096188 GSM2449069 3-week-old snrk2.2/3/6 mutant rosette leaves rosette leaves public 0 ncRNA-Seq 61 PRJNA360412 SAMN06210189 GEO SRX2469203 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-01-06 637 416 Arabidopsis thaliana ILLUMINA 2017-04-14 SRR5151118 SRS1901493 SRP096188 GSM2449070 3-week-old snrk2.2/3/6 mutant rosette leaves rosette leaves public 0 ncRNA-Seq 61 PRJNA360412 SAMN06210189 GEO SRX2469203 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-01-06 668 436 Arabidopsis thaliana ILLUMINA 2017-04-14 SRR5151119 SRS1901493 SRP096188 GSM2449070 3-week-old snrk2.2/3/6 mutant rosette leaves rosette leaves public 0 ncRNA-Seq 100 PRJNA360681 SAMN06214578 GEO SRX2480807 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-01-10 2060 1183 Arabidopsis thaliana ILLUMINA 2017-02-27 SRR5163664 SRS1912431 SRP096350 GSM2451982 Col-0 nrpe1-11 nrpe1-11 mutant 2.5 week above ground tissues public 0 ncRNA-Seq 42 PRJNA369294 SAMN06283972 GEO SRX2529144 Illumina Genome Analyzer IIx SINGLE size fractionation TRANSCRIPTOMIC 2017-01-30 290 193 Arabidopsis thaliana ILLUMINA 2017-02-28 SRR5218911 SRS1950110 SRP098604 GSM2472768 13 days Col-0 wild-type 13-day-old seedlings, wild-type seedlings public 0 ncRNA-Seq 42 PRJNA369294 SAMN06283971 GEO SRX2529145 Illumina Genome Analyzer IIx SINGLE size fractionation TRANSCRIPTOMIC 2017-01-30 310 200 Arabidopsis thaliana ILLUMINA 2017-02-28 SRR5218912 SRS1950111 SRP098604 GSM2472769 13 days Col-0 idn2-3 13-day-old seedlings, idn2-3 mutant seedlings public 0 miRNA-Seq 50 PRJNA380201 SAMN06629358 GEO SRX2663093 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-03-23 506 248 Arabidopsis thaliana ILLUMINA 2017-05-03 SRR5367825 SRS2064989 SRP102346 GSM2546543 Landsberg erecta wild type whole plant whole plant in soil public 0 miRNA-Seq 50 PRJNA380201 SAMN06629357 GEO SRX2663094 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-03-23 547 267 Arabidopsis thaliana ILLUMINA 2017-05-03 SRR5367826 SRS2064990 SRP102346 GSM2546544 Landsberg erecta wild type whole plant whole plant in soil public 0 miRNA-Seq 50 PRJNA380201 SAMN06629356 GEO SRX2663095 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-03-23 442 217 Arabidopsis thaliana ILLUMINA 2017-05-03 SRR5367827 SRS2064991 SRP102346 GSM2546545 Landsberg erecta wild type whole plant whole plant in soil public 0 miRNA-Seq 50 PRJNA380201 SAMN06629355 GEO SRX2663096 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-03-23 364 178 Arabidopsis thaliana ILLUMINA 2017-05-03 SRR5367828 SRS2064992 SRP102346 GSM2546546 Landsberg erecta 35S-RICE1 D52A whole plant whole plant in soil public 0 miRNA-Seq 50 PRJNA380201 SAMN06629354 GEO SRX2663097 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-03-23 389 190 Arabidopsis thaliana ILLUMINA 2017-05-03 SRR5367829 SRS2064993 SRP102346 GSM2546547 Landsberg erecta 35S-RICE1 D52A whole plant whole plant in soil public 0 miRNA-Seq 50 PRJNA380201 SAMN06629353 GEO SRX2663098 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2017-03-23 317 155 Arabidopsis thaliana ILLUMINA 2017-05-03 SRR5367830 SRS2064994 SRP102346 GSM2546548 Landsberg erecta 35S-RICE1 D52A whole plant whole plant in soil public 0 miRNA-Seq 51 PRJNA384594 SAMN06842168 GEO SRX2766985 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2017-04-27 1067 607 Arabidopsis thaliana ILLUMINA 2017-05-01 SRR5483631 SRS2151098 SRP105347 GSM2590491 nrpd1-3 2-week-old seedlings public 0 miRNA-Seq 51 PRJNA384594 SAMN06842169 GEO SRX2766984 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2017-04-27 1185 671 Arabidopsis thaliana ILLUMINA 2017-05-01 SRR5483630 SRS2151099 SRP105347 GSM2590490 WT 2-week-old seedlings public 0 miRNA-Seq 51 PRJNA384594 SAMN06842167 GEO SRX2766986 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2017-04-27 719 406 Arabidopsis thaliana ILLUMINA 2017-05-01 SRR5483632 SRS2151100 SRP105347 GSM2590492 nrpe1-11 2-week-old seedlings public 0 miRNA-Seq 51 PRJNA384594 SAMN06842166 GEO SRX2766987 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2017-04-27 1138 646 Arabidopsis thaliana ILLUMINA 2017-05-01 SRR5483633 SRS2151101 SRP105347 GSM2590493 pkl-1 2-week-old seedlings public 0 miRNA-Seq 51 PRJNA384594 SAMN06842165 GEO SRX2766988 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2017-04-27 807 290 Arabidopsis thaliana ILLUMINA 2017-05-01 SRR5483634 SRS2151102 SRP105347 GSM2590494 WT 2-week-old seedlings public 0 miRNA-Seq 51 PRJNA384594 SAMN06842164 GEO SRX2766989 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2017-04-27 865 285 Arabidopsis thaliana ILLUMINA 2017-05-01 SRR5483635 SRS2151103 SRP105347 GSM2590495 nrpd1-3 2-week-old seedlings public 0 miRNA-Seq 51 PRJNA384594 SAMN06842162 GEO SRX2766991 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2017-04-27 839 274 Arabidopsis thaliana ILLUMINA 2017-05-01 SRR5483637 SRS2151104 SRP105347 GSM2590497 pkl-1 2-week-old seedlings public 0 miRNA-Seq 51 PRJNA384594 SAMN06842163 GEO SRX2766990 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2017-04-27 832 274 Arabidopsis thaliana ILLUMINA 2017-05-01 SRR5483636 SRS2151105 SRP105347 GSM2590496 nrpe1-11 2-week-old seedlings public 0 miRNA-Seq 51 PRJNA384594 SAMN06842161 GEO SRX2766992 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2017-04-27 850 280 Arabidopsis thaliana ILLUMINA 2017-05-01 SRR5483638 SRS2151106 SRP105347 GSM2590498 WT 2-week-old seedlings public 0 miRNA-Seq 51 PRJNA384594 SAMN06842160 GEO SRX2766993 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2017-04-27 784 262 Arabidopsis thaliana ILLUMINA 2017-05-01 SRR5483639 SRS2151107 SRP105347 GSM2590499 nrpd1-3 2-week-old seedlings public 0 miRNA-Seq 51 PRJNA384594 SAMN06842159 GEO SRX2766994 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2017-04-27 844 313 Arabidopsis thaliana ILLUMINA 2017-05-01 SRR5483640 SRS2151108 SRP105347 GSM2590500 nrpe1-11 2-week-old seedlings public 0 miRNA-Seq 51 PRJNA384594 SAMN06842158 GEO SRX2766995 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2017-04-27 852 281 Arabidopsis thaliana ILLUMINA 2017-05-01 SRR5483641 SRS2151109 SRP105347 GSM2590501 pkl-1 2-week-old seedlings public 0 miRNA-Seq 49 PRJNA342475 SAMN05757665 SRX2839563 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC msh1_S2var_sRNA_3 2017-05-21 839 585 Arabidopsis thaliana ILLUMINA 2017-05-21 SRR5581473 SRS2213018 SRP107701 msh1 -/- S2 Variegated, Rep 3 (small RNA-seq) Col-0 msh1 -/- S2 Leaf public 0 miRNA-Seq 49 PRJNA342475 SAMN05757664 SRX2839564 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC msh1_S2var_sRNA_2 2017-05-21 781 548 Arabidopsis thaliana ILLUMINA 2017-05-21 SRR5581472 SRS2213019 SRP107701 msh1 -/- S2 Variegated, Rep 2 (small RNA-seq) Col-0 msh1 -/- S2 Leaf public 0 miRNA-Seq 49 PRJNA342475 SAMN05757662 SRX2839566 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC msh1_S1_sRNA_3 2017-05-21 1106 768 Arabidopsis thaliana ILLUMINA 2017-05-21 SRR5581470 SRS2213020 SRP107701 msh1 -/- S1, Rep 3 (small RNA-seq) Col-0 msh1 -/- S1 Leaf public 0 miRNA-Seq 49 PRJNA342475 SAMN05757663 SRX2839565 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC msh1_S2var_sRNA_1 2017-05-21 761 533 Arabidopsis thaliana ILLUMINA 2017-05-21 SRR5581471 SRS2213021 SRP107701 msh1 -/- S2 Variegated, Rep 1 (small RNA-seq) Col-0 msh1 -/- S2 Leaf public 0 miRNA-Seq 49 PRJNA342475 SAMN05757661 SRX2839567 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC msh1_S1_sRNA_2 2017-05-21 904 636 Arabidopsis thaliana ILLUMINA 2017-05-21 SRR5581469 SRS2213022 SRP107701 msh1 -/- S1, Rep 2 (small RNA-seq) Col-0 msh1 -/- S1 Leaf public 0 miRNA-Seq 49 PRJNA342475 SAMN05757660 SRX2839568 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC msh1_S1_sRNA_1 2017-05-21 960 674 Arabidopsis thaliana ILLUMINA 2017-05-21 SRR5581468 SRS2213023 SRP107701 msh1 -/- S1, Rep 1 (small RNA-seq) Col-0 msh1 -/- S1 Leaf public 0 miRNA-Seq 49 PRJNA342475 SAMN05757659 SRX2839569 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC wtseg_sRNA_2 2017-05-21 863 601 Arabidopsis thaliana ILLUMINA 2017-05-21 SRR5581467 SRS2213024 SRP107701 MSH1 +/+ WT segregant, Rep 2 (small RNA-seq) Col-0 MSH1 +/+ Leaf public 0 miRNA-Seq 49 PRJNA342475 SAMN05757658 SRX2839570 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC wtseg_sRNA_1 2017-05-21 672 470 Arabidopsis thaliana ILLUMINA 2017-05-21 SRR5581466 SRS2213025 SRP107701 MSH1 +/+ WT segregant, Rep 1 (small RNA-seq) Col-0 MSH1 +/+ Leaf public 0 miRNA-Seq 49 PRJNA342475 SAMN05757667 SRX2839571 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC msh1_S2dwf_sRNA_2 2017-05-21 847 602 Arabidopsis thaliana ILLUMINA 2017-05-21 SRR5581465 SRS2213026 SRP107701 msh1 -/- S2 Variegated and Dwarfed, Rep 2 (small RNA-seq) Col-0 msh1 -/- S2 Leaf public 0 miRNA-Seq 49 PRJNA342475 SAMN05757666 SRX2839572 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC msh1_S2dwf_sRNA_1 2017-05-21 913 627 Arabidopsis thaliana ILLUMINA 2017-05-21 SRR5581464 SRS2213028 SRP107701 msh1 -/- S2 Variegated and Dwarfed, Rep 1 (small RNA-seq) Col-0 msh1 -/- S2 Leaf public 0 miRNA-Seq 49 PRJNA342475 SAMN05757668 SRX2839576 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC msh1_S2dwf_sRNA_3 2017-05-21 846 606 Arabidopsis thaliana ILLUMINA 2017-05-21 SRR5581460 SRS2213031 SRP107701 msh1 -/- S2 Variegated and Dwarfed, Rep 3 (small RNA-seq) Col-0 msh1 -/- S2 Leaf public 0 ncRNA-Seq 298 PRJNA311178 SAMN07160872 GEO SRX2848164 HiSeq X Ten PAIRED size fractionation TRANSCRIPTOMIC 2017-05-24 9558 4074 Arabidopsis thaliana ILLUMINA 2017-06-02 SRR5591021 SRS2220819 SRP069764 GSM2637965 ath circRNA 1.14 whole plants public 0 ncRNA-Seq 298 PRJNA311178 SAMN07160871 GEO SRX2848165 HiSeq X Ten PAIRED size fractionation TRANSCRIPTOMIC 2017-05-24 10757 4609 Arabidopsis thaliana ILLUMINA 2017-06-02 SRR5591022 SRS2220820 SRP069764 GSM2637966 ath circRNA 3.90 whole plants public 0 ncRNA-Seq 298 PRJNA311178 SAMN07160870 GEO SRX2848166 HiSeq X Ten PAIRED size fractionation TRANSCRIPTOMIC 2017-05-24 11251 4790 Arabidopsis thaliana ILLUMINA 2017-06-02 SRR5591023 SRS2220821 SRP069764 GSM2637967 ath circRNA 6.50 whole plants public 0 ncRNA-Seq 297 PRJNA311178 SAMN07160869 GEO SRX2848167 HiSeq X Ten PAIRED size fractionation TRANSCRIPTOMIC 2017-05-24 10386 4172 Arabidopsis thaliana ILLUMINA 2017-06-02 SRR5591024 SRS2220822 SRP069764 GSM2637968 ath circRNA 8.00 whole plants public 0 ncRNA-Seq 298 PRJNA311178 SAMN07160868 GEO SRX2848168 HiSeq X Ten PAIRED size fractionation TRANSCRIPTOMIC 2017-05-24 11474 5055 Arabidopsis thaliana ILLUMINA 2017-06-02 SRR5591025 SRS2220823 SRP069764 GSM2637969 ath circRNA roots roots public 0 ncRNA-Seq 297 PRJNA311178 SAMN07160867 GEO SRX2848169 HiSeq X Ten PAIRED size fractionation TRANSCRIPTOMIC 2017-05-24 10975 4579 Arabidopsis thaliana ILLUMINA 2017-06-02 SRR5591026 SRS2220824 SRP069764 GSM2637970 ath circRNA stems stems public 0 ncRNA-Seq 297 PRJNA311178 SAMN07160866 GEO SRX2848170 HiSeq X Ten PAIRED size fractionation TRANSCRIPTOMIC 2017-05-24 12135 5134 Arabidopsis thaliana ILLUMINA 2017-06-02 SRR5591027 SRS2220825 SRP069764 GSM2637971 ath circRNA leaves leaves public 0 ncRNA-Seq 298 PRJNA311178 SAMN07160865 GEO SRX2848171 HiSeq X Ten PAIRED size fractionation TRANSCRIPTOMIC 2017-05-24 12353 5154 Arabidopsis thaliana ILLUMINA 2017-06-02 SRR5591028 SRS2220826 SRP069764 GSM2637972 ath circRNA flowers flowers public 0 ncRNA-Seq 298 PRJNA311178 SAMN07160864 GEO SRX2848172 HiSeq X Ten PAIRED size fractionation TRANSCRIPTOMIC 2017-05-24 9971 4267 Arabidopsis thaliana ILLUMINA 2017-06-02 SRR5591029 SRS2220827 SRP069764 GSM2637973 ath circRNA Siliques siliques public 0 ncRNA-Seq 297 PRJNA311178 SAMN07160863 GEO SRX2848173 HiSeq X Ten PAIRED size fractionation TRANSCRIPTOMIC 2017-05-24 11527 4887 Arabidopsis thaliana ILLUMINA 2017-06-02 SRR5591030 SRS2220828 SRP069764 GSM2637974 ath circRNA without stress treatments whole plants public 0 ncRNA-Seq 297 PRJNA311178 SAMN07160862 GEO SRX2848174 HiSeq X Ten PAIRED size fractionation TRANSCRIPTOMIC 2017-05-24 11213 4677 Arabidopsis thaliana ILLUMINA 2017-06-02 SRR5591031 SRS2220829 SRP069764 GSM2637975 ath circRNA drought stress whole plants public 0 ncRNA-Seq 297 PRJNA311178 SAMN07160861 GEO SRX2848175 HiSeq X Ten PAIRED size fractionation TRANSCRIPTOMIC 2017-05-24 13493 5732 Arabidopsis thaliana ILLUMINA 2017-06-02 SRR5591032 SRS2220830 SRP069764 GSM2637976 ath circRNA salt stress whole plants public 0 ncRNA-Seq 297 PRJNA311178 SAMN07160860 GEO SRX2848176 HiSeq X Ten PAIRED size fractionation TRANSCRIPTOMIC 2017-05-24 15043 6396 Arabidopsis thaliana ILLUMINA 2017-06-02 SRR5591033 SRS2220831 SRP069764 GSM2637977 ath circRNA heat stress whole plants public 0 OTHER 46 PRJNA149671 SAMN00764100 GEO SRX110653 Illumina Genome Analyzer II SINGLE PCR OTHER GSM844489: rdr2_sRNA 2012-01-21 489 376 Arabidopsis thaliana ILLUMINA 2012-11-23 SRR388208 SRS281913 SRP009656 GSM844489 Columbia-0 rdr2 mutant Mixed stage inflorescence tissue public 0 OTHER 42 PRJNA149671 SAMN00764101 GEO SRX110654 Illumina Genome Analyzer II SINGLE PCR OTHER GSM844490: nrpd1 rdr2_sRNA 2012-01-21 663 350 Arabidopsis thaliana ILLUMINA 2012-11-23 SRR388209 SRS281914 SRP009656 GSM844490 Columbia-0 nrpd1a-4 mutant (PolIV mutant) Mixed stage inflorescence tissue public 0 OTHER 46 PRJNA149671 SAMN00764102 GEO SRX110655 Illumina Genome Analyzer II SINGLE PCR OTHER GSM844491: WT (Col-0)_sRNA 2012-01-21 570 437 Arabidopsis thaliana ILLUMINA 2012-11-23 SRR388210 SRS281915 SRP009656 GSM844491 Columbia-0 wild type Col-0 plant Mixed stage inflorescence tissue public 0 miRNA-Seq 50 PRJNA237038 SAMN02604405 DDPSC SRX457625 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 35S:AtMIR390a-Lfy 2014-02-06 1757 1241 Arabidopsis thaliana ILLUMINA 2014-04-08 SRR1163504 SRS549885 SRP036134 35S:AtMIR390a-Lfy Flower public 0 miRNA-Seq 50 PRJNA237038 SAMN02604406 DDPSC SRX466607 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 35S:AtMIR390-Ch42 2014-02-06 1388 1021 Arabidopsis thaliana ILLUMINA 2014-04-08 SRR1163718 SRS554280 SRP036134 35S:AtMIR390a-Ch42 Seedling public 0 miRNA-Seq 50 PRJNA237038 SAMN02604407 DDPSC SRX466662 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 35S:AtMIR390a-Ft 2014-02-06 1652 1174 Arabidopsis thaliana ILLUMINA 2014-04-08 SRR1163720 SRS554335 SRP036134 35S:AtMIR390a-Ft Flower public 0 miRNA-Seq 50 PRJNA237038 SAMN02604408 DDPSC SRX466993 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 35S:AtMIR390a-Trich 2014-02-06 1602 1146 Arabidopsis thaliana ILLUMINA 2014-04-08 SRR1164378 SRS554665 SRP036134 35S:AtMIR390a-Trich Seedling public 0 miRNA-Seq 50 PRJNA237038 SAMN02604409 DDPSC SRX466997 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 35S:GUS 2014-02-06 975 714 Arabidopsis thaliana ILLUMINA 2014-04-08 SRR1164382 SRS554666 SRP036134 35S:GUS Flower public 0 miRNA-Seq 50 PRJNA237038 SAMN02604410 DDPSC SRX467008 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 35S:AtTAS1c-D3Trich-D4Ft 2014-02-07 1300 962 Arabidopsis thaliana ILLUMINA 2014-04-08 SRR1164433 SRS554677 SRP036134 35S:AtTAS1c-D3Trich-D4Ft Flower public 0 miRNA-Seq 50 PRJNA237038 SAMN02604411 DDPSC SRX467010 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 35S:AtTAS1c-D3Ft-D4Trich 2014-02-06 1325 974 Arabidopsis thaliana ILLUMINA 2014-04-08 SRR1164434 SRS554678 SRP036134 35S:AtTAS1c-D3Ft-D4Trich Flower public 0 OTHER 36 PRJNA238653 SAMN02645821 GEO SRX472846 Illumina HiSeq 2000 SINGLE other TRANSCRIPTOMIC 2014-02-19 4035 2913 Arabidopsis thaliana ILLUMINA 2014-09-08 SRR1171802 SRS559267 SRP038129 GSM1330569 young leaf leaf public 0 OTHER 36 PRJNA238653 SAMN02645825 GEO SRX472847 Illumina HiSeq 2000 SINGLE other TRANSCRIPTOMIC 2014-02-19 3781 2703 Arabidopsis thaliana ILLUMINA 2014-09-08 SRR1171803 SRS559268 SRP038129 GSM1330570 mature leaf leaf public 0 OTHER 36 PRJNA238653 SAMN02645828 GEO SRX472848 Illumina HiSeq 2000 SINGLE other TRANSCRIPTOMIC 2014-02-19 6615 4497 Arabidopsis thaliana ILLUMINA 2014-09-08 SRR1171804 SRS559269 SRP038129 GSM1330571 early senescence leaf biorep 1 leaf public 0 OTHER 36 PRJNA238653 SAMN02645822 GEO SRX472849 Illumina HiSeq 2000 SINGLE other TRANSCRIPTOMIC 2014-02-19 5842 4189 Arabidopsis thaliana ILLUMINA 2014-09-08 SRR1171805 SRS559270 SRP038129 GSM1330572 late senescence leaf biorep 1 leaf public 0 OTHER 50 PRJNA238653 SAMN02645826 GEO SRX472850 Illumina HiSeq 2000 SINGLE other TRANSCRIPTOMIC 2014-02-19 6410 4020 Arabidopsis thaliana ILLUMINA 2014-09-08 SRR1171806 SRS559271 SRP038129 GSM1330573 early senescence leaf biorep 2 leaf public 0 OTHER 50 PRJNA238653 SAMN02645827 GEO SRX472851 Illumina HiSeq 2000 SINGLE other TRANSCRIPTOMIC 2014-02-19 1467 959 Arabidopsis thaliana ILLUMINA 2014-09-08 SRR1171807 SRS559272 SRP038129 GSM1330574 late senescence leaf biorep 2 leaf public 0 miRNA-Seq 22 PRJNA245364 SAMN02736989 NATIONAL TAIWAN UNIVERSITY SRX526989 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Shih-Shun Lin 2015-11-30 271 197 Arabidopsis thaliana ILLUMINA 2015-07-22 SRR1262389 SRS597354 SRP041433 Tu-GR/Col-0 missing leaf public 0 miRNA-Seq 22 PRJNA245364 SAMN02736989 NATIONAL TAIWAN UNIVERSITY SRX526989 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Shih-Shun Lin 2015-11-30 249 179 Arabidopsis thaliana ILLUMINA 2015-07-22 SRR1262546 SRS597354 SRP041433 Tu-GR/Col-0 missing leaf public 0 miRNA-Seq 21 PRJNA245364 SAMN02736990 NATIONAL TAIWAN UNIVERSITY SRX685646 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Shih-Shun Lin 2015-11-30 254 180 Arabidopsis thaliana ILLUMINA 2015-07-22 SRR1262601 SRS597355 SRP041433 Tu-GK/col-0 missing leaf public 0 miRNA-Seq 22 PRJNA245364 SAMN02736990 NATIONAL TAIWAN UNIVERSITY SRX685646 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Shih-Shun Lin 2015-11-30 268 194 Arabidopsis thaliana ILLUMINA 2015-07-22 SRR1262545 SRS597355 SRP041433 Tu-GK/col-0 missing leaf public 0 miRNA-Seq 100 PRJNA245874 SAMN02741283 GEO SRX529402 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 978 655 Arabidopsis thaliana ILLUMINA 2014-11-14 SRR1265987 SRS599112 SRP041575 GSM1376900 wild type Col_small RNA-seq unopened flower buds public 0 miRNA-Seq 100 PRJNA245874 SAMN02741285 GEO SRX529404 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 898 595 Arabidopsis thaliana ILLUMINA 2014-11-14 SRR1265989 SRS599114 SRP041575 GSM1376902 pol4 mutant pol4_small RNA-seq unopened flower buds public 0 miRNA-Seq 100 PRJNA245874 SAMN02741290 GEO SRX529409 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 869 580 Arabidopsis thaliana ILLUMINA 2014-11-14 SRR1265994 SRS599119 SRP041575 GSM1376907 ddm1 mutant ddm1_small RNA-seq unopened flower buds public 0 miRNA-Seq 50 PRJNA245874 SAMN02741291 GEO SRX529413 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 369 214 Arabidopsis thaliana ILLUMINA 2014-11-14 SRR1265998 SRS599123 SRP041575 GSM1376911 ddm1-dcl3 mutant ddm1-dcl3_small RNA-seq unopened flower buds public 0 miRNA-Seq 50 PRJNA245874 SAMN02741292 GEO SRX529414 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 353 209 Arabidopsis thaliana ILLUMINA 2014-11-14 SRR1265999 SRS599124 SRP041575 GSM1376912 ddm1-dcl3 mutant ddm1-dcl3_small RNA-seq unopened flower buds public 0 miRNA-Seq 50 PRJNA245874 SAMN02741294 GEO SRX529415 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 581 336 Arabidopsis thaliana ILLUMINA 2014-11-14 SRR1266000 SRS599125 SRP041575 GSM1376913 ddm1-ago6 mutant ddm1-ago6_small RNA-seq unopened flower buds public 0 miRNA-Seq 50 PRJNA245874 SAMN02741301 GEO SRX529416 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 702 405 Arabidopsis thaliana ILLUMINA 2014-11-14 SRR1266001 SRS599126 SRP041575 GSM1376914 ddm1-ago6 mutant ddm1-ago6_small RNA-seq unopened flower buds public 0 miRNA-Seq 50 PRJNA245874 SAMN02741296 GEO SRX529418 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 853 514 Arabidopsis thaliana ILLUMINA 2014-11-14 SRR1266003 SRS599128 SRP041575 GSM1376916 ddm1-pol4-rdr6 mutant ddm1-pol4-rdr6_small RNA-seq unopened flower buds public 0 miRNA-Seq 50 PRJNA245874 SAMN02741299 GEO SRX529419 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 207 124 Arabidopsis thaliana ILLUMINA 2014-11-14 SRR1266004 SRS599129 SRP041575 GSM1376917 ddm1-pol4-rdr6 mutant ddm1-pol4-rdr6_small RNA-seq unopened flower buds public 0 miRNA-Seq 51 PRJNA245920 SAMN02741742 GEO SRX530085 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 1006 698 Arabidopsis thaliana ILLUMINA 2014-11-12 SRR1266859 SRS599707 SRP041593 GSM1377370 WT WT smRNAseq unopened flower buds public 0 miRNA-Seq 51 PRJNA245920 SAMN02741741 GEO SRX530086 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 1360 934 Arabidopsis thaliana ILLUMINA 2014-11-12 SRR1266860 SRS599708 SRP041593 GSM1377371 WT WT smRNAseq unopened flower buds public 0 miRNA-Seq 51 PRJNA245920 SAMN02741722 GEO SRX530087 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 758 525 Arabidopsis thaliana ILLUMINA 2014-11-12 SRR1266861 SRS599709 SRP041593 GSM1377372 nrpd1 nrpd1 smRNAseq unopened flower buds public 0 miRNA-Seq 51 PRJNA245920 SAMN02741723 GEO SRX530088 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 662 464 Arabidopsis thaliana ILLUMINA 2014-11-12 SRR1266862 SRS599710 SRP041593 GSM1377373 nrpd1 nrpd1 smRNAseq unopened flower buds public 0 miRNA-Seq 51 PRJNA245920 SAMN02741734 GEO SRX530089 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-02 888 616 Arabidopsis thaliana ILLUMINA 2014-11-12 SRR1266863 SRS599711 SRP041593 GSM1377374 dcl3 dcl3 smRNAseq unopened flower buds public 0 miRNA-Seq 51 PRJNA245920 SAMN02741713 GEO SRX530090 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 551 383 Arabidopsis thaliana ILLUMINA 2014-11-12 SRR1266864 SRS599712 SRP041593 GSM1377375 dcl3 dcl3 smRNAseq unopened flower buds public 0 miRNA-Seq 51 PRJNA245920 SAMN02741715 GEO SRX530091 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 799 554 Arabidopsis thaliana ILLUMINA 2014-11-12 SRR1266865 SRS599713 SRP041593 GSM1377376 rdr2 rdr2 smRNAseq unopened flower buds public 0 miRNA-Seq 51 PRJNA245920 SAMN02741724 GEO SRX530092 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 577 403 Arabidopsis thaliana ILLUMINA 2014-11-12 SRR1266866 SRS599714 SRP041593 GSM1377377 rdr2 rdr2 smRNAseq unopened flower buds public 0 miRNA-Seq 51 PRJNA245920 SAMN02741714 GEO SRX530093 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 647 452 Arabidopsis thaliana ILLUMINA 2014-11-12 SRR1266867 SRS599715 SRP041593 GSM1377378 dcl234 dcl234 smRNAseq unopened flower buds public 0 miRNA-Seq 51 PRJNA245920 SAMN02741739 GEO SRX530094 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 872 610 Arabidopsis thaliana ILLUMINA 2014-11-12 SRR1266868 SRS599716 SRP041593 GSM1377379 dcl234 dcl234 smRNAseq unopened flower buds public 0 miRNA-Seq 51 PRJNA245920 SAMN02741716 GEO SRX530095 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 617 429 Arabidopsis thaliana ILLUMINA 2014-11-12 SRR1266869 SRS599717 SRP041593 GSM1377380 dcl 234 nrpd1 dcl234 nrpd1 smRNAseq unopened flower buds public 0 miRNA-Seq 51 PRJNA245920 SAMN02741729 GEO SRX530096 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 975 677 Arabidopsis thaliana ILLUMINA 2014-11-12 SRR1266870 SRS599718 SRP041593 GSM1377381 dcl 234 nrpd1 dcl234 nrpd1 smRNAseq unopened flower buds public 0 miRNA-Seq 51 PRJNA245920 SAMN02741737 GEO SRX530097 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-04-30 658 421 Arabidopsis thaliana ILLUMINA 2014-11-12 SRR1266871 SRS599719 SRP041593 GSM1377382 clasy1 clasy1 smRNAseq unopened flower buds public 0 ncRNA-Seq 26 PRJNA246262 SAMN02746160 GEO SRX533514 Ion Torrent PGM SINGLE size fractionation TRANSCRIPTOMIC 2014-05-06 562 464 Arabidopsis halleri ION_TORRENT 2014-05-09 SRR1271756 SRS602315 SRP041692 GSM1378110 flowers stage 1-12 public 0 ncRNA-Seq 26 PRJNA246262 SAMN02746162 GEO SRX533513 Ion Torrent PGM SINGLE size fractionation TRANSCRIPTOMIC 2014-05-06 593 493 Arabidopsis halleri ION_TORRENT 2014-05-09 SRR1271755 SRS602316 SRP041692 GSM1378109 flowers stage 1-12 public 0 ncRNA-Seq 25 PRJNA246262 SAMN02746161 GEO SRX533515 Ion Torrent PGM SINGLE size fractionation TRANSCRIPTOMIC 2014-05-06 581 486 Arabidopsis halleri ION_TORRENT 2014-05-09 SRR1271757 SRS602317 SRP041692 GSM1378111 flowers stage 1-12 public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798675 GEO SRX551619 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 811 543 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297338 SRS619318 SRP042220 GSM1397834 Col-0 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798675 GEO SRX551619 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 812 543 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297339 SRS619318 SRP042220 GSM1397834 Col-0 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798677 GEO SRX551620 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 673 451 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297340 SRS619319 SRP042220 GSM1397835 Col-0 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798677 GEO SRX551620 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 672 450 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297341 SRS619319 SRP042220 GSM1397835 Col-0 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798672 GEO SRX551621 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 764 509 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297342 SRS619320 SRP042220 GSM1397836 Col-0 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798672 GEO SRX551621 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 765 509 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297343 SRS619320 SRP042220 GSM1397836 Col-0 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798682 GEO SRX551622 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 772 518 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297344 SRS619321 SRP042220 GSM1397837 ein5-1 ski2-3 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798682 GEO SRX551622 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 773 518 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297345 SRS619321 SRP042220 GSM1397837 ein5-1 ski2-3 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798674 GEO SRX551623 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 829 555 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297346 SRS619322 SRP042220 GSM1397838 ein5-1 ski2-3 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798674 GEO SRX551623 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 828 553 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297347 SRS619322 SRP042220 GSM1397838 ein5-1 ski2-3 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798670 GEO SRX551624 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 973 648 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297348 SRS619323 SRP042220 GSM1397839 ein5-1 ski2-3 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798670 GEO SRX551624 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 975 649 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297349 SRS619323 SRP042220 GSM1397839 ein5-1 ski2-3 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798680 GEO SRX551625 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 782 522 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297350 SRS619324 SRP042220 GSM1397840 rdr6-11 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798680 GEO SRX551625 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 783 522 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297351 SRS619324 SRP042220 GSM1397840 rdr6-11 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798669 GEO SRX551626 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 851 569 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297352 SRS619325 SRP042220 GSM1397841 rdr6-11 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798669 GEO SRX551626 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 851 568 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297353 SRS619325 SRP042220 GSM1397841 rdr6-11 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798673 GEO SRX551627 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 743 499 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297354 SRS619326 SRP042220 GSM1397842 rdr6-11 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798673 GEO SRX551627 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 742 497 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297355 SRS619326 SRP042220 GSM1397842 rdr6-11 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798671 GEO SRX551628 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 820 547 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297356 SRS619327 SRP042220 GSM1397843 rdr6-11 ein5-1 ski2-3 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798671 GEO SRX551628 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 821 547 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297357 SRS619327 SRP042220 GSM1397843 rdr6-11 ein5-1 ski2-3 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798679 GEO SRX551629 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 806 538 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297358 SRS619328 SRP042220 GSM1397844 rdr6-11 ein5-1 ski2-3 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798679 GEO SRX551629 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 805 537 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297359 SRS619328 SRP042220 GSM1397844 rdr6-11 ein5-1 ski2-3 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798681 GEO SRX551630 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 814 549 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297360 SRS619329 SRP042220 GSM1397845 rdr6-11 ein5-1 ski2-3 plant aerial tissue public 0 ncRNA-Seq 51 PRJNA248453 SAMN02798681 GEO SRX551630 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2014-05-23 813 547 Arabidopsis thaliana ILLUMINA 2015-04-13 SRR1297361 SRS619329 SRP042220 GSM1397845 rdr6-11 ein5-1 ski2-3 plant aerial tissue public 0 miRNA-Seq 51 PRJNA251351 SAMN02820857 GEO SRX559586 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-06-02 1660 1089 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR1312896 SRS624137 SRP042618 GSM1402274 control (Col) Col seedlings seedling public 0 miRNA-Seq 51 PRJNA251351 SAMN02820850 GEO SRX559587 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-06-02 1508 997 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR1312888 SRS624138 SRP042618 GSM1402275 control (Col) Col seedlings seedling public 0 miRNA-Seq 51 PRJNA251351 SAMN02820853 GEO SRX559588 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-06-02 515 378 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR1312897 SRS624139 SRP042618 GSM1402276 control (Col) Col seedlings seedling public 0 miRNA-Seq 51 PRJNA251351 SAMN02820856 GEO SRX559589 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-06-02 1259 831 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR1312898 SRS624140 SRP042618 GSM1402277 AGO10 OE AGO10 OE seedlings seedling public 0 miRNA-Seq 51 PRJNA251351 SAMN02820863 GEO SRX559590 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-06-02 1664 1113 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR1312899 SRS624141 SRP042618 GSM1402278 AGO10 OE AGO10 OE seedlings seedling public 0 miRNA-Seq 51 PRJNA251351 SAMN02820864 GEO SRX559591 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-06-02 603 443 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR1312900 SRS624142 SRP042618 GSM1402279 AGO10 OE AGO10 OE seedlings seedling public 0 miRNA-Seq 51 PRJNA251351 SAMN02820859 GEO SRX559592 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-06-02 733 532 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR1312901 SRS624143 SRP042618 GSM1402280 AGO10 OE 4mAGO1 AGO10 OE 4mAGO1 seedlings seedling public 0 miRNA-Seq 51 PRJNA251351 SAMN02820858 GEO SRX559593 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-06-02 732 480 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR1312902 SRS624144 SRP042618 GSM1402281 AGO10 OE AGO10 OE seedlings seedling public 0 miRNA-Seq 51 PRJNA251351 SAMN02820861 GEO SRX559594 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-06-02 696 454 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR1312903 SRS624145 SRP042618 GSM1402282 sdn1 sdn2 AGO10 OE sdn1 sdn2 AGO10 OE seedlings seedling public 0 miRNA-Seq 51 PRJNA251351 SAMN02820855 GEO SRX559595 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-06-02 758 551 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR1312904 SRS624146 SRP042618 GSM1402283 AGO10 OE AGO10 OE inflorescence inflorescence public 0 miRNA-Seq 51 PRJNA251351 SAMN02820866 GEO SRX559596 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-06-02 914 662 Arabidopsis thaliana ILLUMINA 2017-01-26 SRR1312905 SRS624147 SRP042618 GSM1402284 sdn1 sdn2 AGO10 OE sdn1 sdn2 AGO10 OE inflorescence inflorescence public 0 miRNA-Seq 51 PRJNA259631 SAMN03009903 GEO SRX688597 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-27 1045 657 Arabidopsis thaliana ILLUMINA 2015-07-08 SRR1560118 SRS691167 SRP045820 GSM1489494 WT Ler inflorescence inflorescence public 0 miRNA-Seq 51 PRJNA259631 SAMN03009904 GEO SRX688598 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-27 1092 697 Arabidopsis thaliana ILLUMINA 2015-07-08 SRR1560119 SRS691168 SRP045820 GSM1489495 WT Ler inflorescence inflorescence public 0 miRNA-Seq 51 PRJNA259631 SAMN03009905 GEO SRX688599 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-27 1166 749 Arabidopsis thaliana ILLUMINA 2015-07-08 SRR1560120 SRS691169 SRP045820 GSM1489496 hen1-2 inflorescence inflorescence public 0 miRNA-Seq 51 PRJNA259631 SAMN03009906 GEO SRX688600 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-27 1020 650 Arabidopsis thaliana ILLUMINA 2015-07-08 SRR1560121 SRS691170 SRP045820 GSM1489497 hen1-2 inflorescence inflorescence public 0 miRNA-Seq 51 PRJNA259631 SAMN03009907 GEO SRX688601 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-27 1042 650 Arabidopsis thaliana ILLUMINA 2015-07-08 SRR1560122 SRS691171 SRP045820 GSM1489498 hen1-2/heso1-2 inflorescence inflorescence public 0 miRNA-Seq 51 PRJNA259631 SAMN03009908 GEO SRX688602 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-27 951 597 Arabidopsis thaliana ILLUMINA 2015-07-08 SRR1560123 SRS691172 SRP045820 GSM1489499 hen1-2/heso1-2 inflorescence inflorescence public 0 miRNA-Seq 51 PRJNA259631 SAMN03009909 GEO SRX688603 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-27 1006 654 Arabidopsis thaliana ILLUMINA 2015-07-08 SRR1560124 SRS691173 SRP045820 GSM1489500 hen1-2/heso1-2/urt1-3 inflorescence inflorescence public 0 miRNA-Seq 51 PRJNA259631 SAMN03009910 GEO SRX688604 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-27 954 608 Arabidopsis thaliana ILLUMINA 2015-07-08 SRR1560125 SRS691174 SRP045820 GSM1489501 hen1-2/heso1-2/urt1-3 inflorescence inflorescence public 0 miRNA-Seq 51 PRJNA259631 SAMN03009911 GEO SRX688605 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-27 1093 735 Arabidopsis thaliana ILLUMINA 2015-07-08 SRR1560126 SRS691175 SRP045820 GSM1489502 heso-1-2 inflorescence inflorescence public 0 miRNA-Seq 51 PRJNA259631 SAMN03009912 GEO SRX688606 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-27 1316 890 Arabidopsis thaliana ILLUMINA 2015-07-08 SRR1560127 SRS691176 SRP045820 GSM1489503 heso-1-2 inflorescence inflorescence public 0 miRNA-Seq 51 PRJNA259631 SAMN03009913 GEO SRX688607 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-27 1347 918 Arabidopsis thaliana ILLUMINA 2015-07-08 SRR1560128 SRS691177 SRP045820 GSM1489504 heso1-2/utr1-3 inflorescence inflorescence public 0 miRNA-Seq 51 PRJNA259631 SAMN03009914 GEO SRX688608 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-27 1150 772 Arabidopsis thaliana ILLUMINA 2015-07-08 SRR1560129 SRS691178 SRP045820 GSM1489505 heso1-2/utr1-3 inflorescence inflorescence public 0 ncRNA-Seq 51 PRJNA259843 SAMN03013527 GEO SRX689909 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-29 323 220 Arabidopsis thaliana ILLUMINA 2014-09-05 SRR1561605 SRS692430 SRP045894 GSM1493819 wildtype systemic leaves after mock infection leaf public 0 ncRNA-Seq 40 PRJNA259843 SAMN03013528 GEO SRX689910 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-29 183 116 Arabidopsis thaliana ILLUMINA 2014-09-05 SRR1561606 SRS692431 SRP045894 GSM1493820 rdr1; rdr6 systemic leaves after virus infection leaf public 0 ncRNA-Seq 51 PRJNA259843 SAMN03013529 GEO SRX689911 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-29 770 491 Arabidopsis thaliana ILLUMINA 2014-09-05 SRR1561607 SRS692432 SRP045894 GSM1493821 wildtype systemic leaves after virus infection leaf public 0 ncRNA-Seq 51 PRJNA259843 SAMN03013530 GEO SRX689912 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-29 857 538 Arabidopsis thaliana ILLUMINA 2014-09-05 SRR1561608 SRS692433 SRP045894 GSM1493822 rdr1 systemic leaves after virus infection leaf public 0 ncRNA-Seq 51 PRJNA259843 SAMN03013531 GEO SRX689913 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-08-29 712 445 Arabidopsis thaliana ILLUMINA 2014-09-05 SRR1561609 SRS692434 SRP045894 GSM1493823 rdr6 systemic leaves after virus infection leaf public 0 ncRNA-Seq 46 PRJNA260113 SAMN03016036 GEO SRX694618 Illumina Genome Analyzer SINGLE size fractionation TRANSCRIPTOMIC 2014-09-05 259 177 Arabidopsis thaliana ILLUMINA 2014-09-08 SRR1567670 SRS695983 SRP046256 GSM1495677 wild type Inflorescence inflorescence public 0 ncRNA-Seq 46 PRJNA260113 SAMN03016038 GEO SRX694620 Illumina Genome Analyzer SINGLE size fractionation TRANSCRIPTOMIC 2014-09-05 262 182 Arabidopsis thaliana ILLUMINA 2014-09-08 SRR1567672 SRS695985 SRP046256 GSM1495679 wild type Pollen pollen public 0 ncRNA-Seq 46 PRJNA260113 SAMN03016039 GEO SRX694621 Illumina Genome Analyzer SINGLE size fractionation TRANSCRIPTOMIC 2014-09-05 241 135 Arabidopsis thaliana ILLUMINA 2014-09-08 SRR1567673 SRS695986 SRP046256 GSM1495680 wild type Sperm sperm public 0 miRNA-Seq 51 PRJNA260491 SAMN03023734 GEO SRX695819 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-08 1719 1555 Arabidopsis thaliana ILLUMINA 2015-02-02 SRR1569249 SRS696927 SRP046310 GSM1499348 Columbia drm3-1 small_RNAseq-drm3 floral tissue public 0 miRNA-Seq 51 PRJNA260491 SAMN03023733 GEO SRX695818 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-08 1906 1711 Arabidopsis thaliana ILLUMINA 2015-02-02 SRR1569248 SRS696928 SRP046310 GSM1499347 Columbia Wild type small_RNAseq-Col floral tissue public 0 miRNA-Seq 51 PRJNA260491 SAMN03023736 GEO SRX695821 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-08 1795 1636 Arabidopsis thaliana ILLUMINA 2015-02-02 SRR1569251 SRS696929 SRP046310 GSM1499350 Columbia nrpe1-12 small_RNAseq-nrpe1 floral tissue public 0 miRNA-Seq 51 PRJNA260491 SAMN03023735 GEO SRX695820 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-08 2140 1931 Arabidopsis thaliana ILLUMINA 2015-02-02 SRR1569250 SRS696930 SRP046310 GSM1499349 Columbia drm2-2 small_RNAseq-drm2 floral tissue public 0 ncRNA-Seq 51 PRJNA260855 SAMN03032179 GEO SRX699875 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-12 963 631 Arabidopsis thaliana ILLUMINA 2015-08-19 SRR1573888 SRS700094 SRP047055 GSM1502981 Columbia hen1-8 ntp2-1 hen1-8 ntp2-1 inflorescences public 0 ncRNA-Seq 51 PRJNA260855 SAMN03032178 GEO SRX699874 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-12 928 612 Arabidopsis thaliana ILLUMINA 2015-08-19 SRR1573887 SRS700095 SRP047055 GSM1502980 Columbia hen1-8 hen1-8 inflorescences public 0 ncRNA-Seq 51 PRJNA260855 SAMN03032180 GEO SRX699876 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-12 819 535 Arabidopsis thaliana ILLUMINA 2015-08-19 SRR1573889 SRS700096 SRP047055 GSM1502982 Columbia hen1-8 urt1-1 hen1-8 urt1-1 inflorescences public 0 ncRNA-Seq 51 PRJNA260855 SAMN03032181 GEO SRX699877 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-12 720 476 Arabidopsis thaliana ILLUMINA 2015-08-19 SRR1573890 SRS700097 SRP047055 GSM1502983 Columbia hen1-8 ntp4-1 hen1-8 ntp4-1 inflorescences public 0 ncRNA-Seq 51 PRJNA260855 SAMN03032182 GEO SRX699878 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-12 1044 685 Arabidopsis thaliana ILLUMINA 2015-08-19 SRR1573891 SRS700098 SRP047055 GSM1502984 Columbia hen1-8 ntp5-1 hen1-8 ntp5-1 inflorescences public 0 ncRNA-Seq 51 PRJNA260855 SAMN03032183 GEO SRX699879 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-12 1582 1070 Arabidopsis thaliana ILLUMINA 2015-08-19 SRR1573892 SRS700099 SRP047055 GSM1502985 Columbia hen1-8 ntp6-1 hen1-8 ntp6-1 inflorescences public 0 ncRNA-Seq 51 PRJNA260855 SAMN03032184 GEO SRX699880 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-12 691 450 Arabidopsis thaliana ILLUMINA 2015-08-19 SRR1573893 SRS700100 SRP047055 GSM1502986 Columbia hen1-8 ntp7-1 hen1-8 ntp7-1 inflorescences public 0 ncRNA-Seq 51 PRJNA260855 SAMN03032186 GEO SRX699882 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-12 1004 656 Arabidopsis thaliana ILLUMINA 2015-08-19 SRR1573895 SRS700101 SRP047055 GSM1502988 Columbia hen1-8 ntp10-1 hen1-8 ntp10-1 inflorescences public 0 ncRNA-Seq 51 PRJNA260855 SAMN03032185 GEO SRX699881 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-12 1327 870 Arabidopsis thaliana ILLUMINA 2015-08-19 SRR1573894 SRS700102 SRP047055 GSM1502987 Columbia hen1-8 ntp8-1 hen1-8 ntp8-1 inflorescences public 0 ncRNA-Seq 51 PRJNA260855 SAMN03032187 GEO SRX699883 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-12 325 201 Arabidopsis thaliana ILLUMINA 2015-08-19 SRR1573896 SRS700103 SRP047055 GSM1502989 Columbia hen1-8 hen1-8 inflorescences public 0 ncRNA-Seq 51 PRJNA260855 SAMN03032188 GEO SRX699884 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-12 528 332 Arabidopsis thaliana ILLUMINA 2015-08-19 SRR1573897 SRS700104 SRP047055 GSM1502990 Columbia hen1-8 heso1-1 hen1-8 heso1-1 inflorescences public 0 ncRNA-Seq 51 PRJNA260855 SAMN03032189 GEO SRX699885 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-09-12 430 273 Arabidopsis thaliana ILLUMINA 2015-08-19 SRR1573898 SRS700105 SRP047055 GSM1502991 Columbia hen1-8 mee44 hen1-8 mee44 inflorescences public 0 ncRNA-Seq 23 PRJNA264526 SAMN03135196 GEO SRX738305 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-24 358 260 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR1618839 SRS726141 SRP049163 GSM1529874 10 days after germination Columbia Whole seedlings Whole organism public 0 ncRNA-Seq 20 PRJNA264526 SAMN03135203 GEO SRX738309 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-23 165 120 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR1618844 SRS726143 SRP049163 GSM1529878 10 days after germination Columbia Whole seedlings Whole organism public 0 ncRNA-Seq 19 PRJNA264526 SAMN03135198 GEO SRX738307 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-23 122 89 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR1618841 SRS726144 SRP049163 GSM1529876 10 days after germination Columbia Whole seedlings Whole organism public 0 ncRNA-Seq 20 PRJNA264526 SAMN03135198 GEO SRX738307 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-23 124 90 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR1618842 SRS726144 SRP049163 GSM1529876 10 days after germination Columbia Whole seedlings Whole organism public 0 ncRNA-Seq 20 PRJNA264526 SAMN03135204 GEO SRX738311 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-23 111 82 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR1618846 SRS726147 SRP049163 GSM1529880 10 days after germination Columbia Whole seedlings Whole organism public 0 ncRNA-Seq 20 PRJNA264526 SAMN03135204 GEO SRX738311 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-23 126 92 Arabidopsis thaliana ILLUMINA 2015-10-01 SRR1618847 SRS726147 SRP049163 GSM1529880 10 days after germination Columbia Whole seedlings Whole organism public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145825 GEO SRX746050 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 735 641 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634280 SRS732640 SRP049369 GSM1533527 wildtype Inflorescence tissue containing young flowers_Col0 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145832 GEO SRX746051 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 988 883 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634281 SRS732641 SRP049369 GSM1533528 wildtype Inflorescence tissue containing young flowers_Col1 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145827 GEO SRX746052 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 809 702 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634282 SRS732642 SRP049369 GSM1533529 wildtype Inflorescence tissue containing young flowers_Col2 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145831 GEO SRX746053 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 790 707 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634283 SRS732643 SRP049369 GSM1533530 frg1/2 Inflorescence tissue containing young flowers_frg1/2 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145826 GEO SRX746054 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 714 618 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634284 SRS732644 SRP049369 GSM1533531 frg1/2 Inflorescence tissue containing young flowers_frg1/2 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145828 GEO SRX746055 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 799 723 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634285 SRS732645 SRP049369 GSM1533532 frg1/2 Inflorescence tissue containing young flowers_frg1/2 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145833 GEO SRX746056 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 799 702 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634286 SRS732646 SRP049369 GSM1533533 frg1 to frg5 Inflorescence tissue containing young flowers_frg1to5 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145842 GEO SRX746057 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 871 777 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634287 SRS732647 SRP049369 GSM1533534 frg1 to frg5 Inflorescence tissue containing young flowers_frg1to5 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145838 GEO SRX746058 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 743 654 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634288 SRS732648 SRP049369 GSM1533535 frg1 to frg5 Inflorescence tissue containing young flowers_frg1to5 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145836 GEO SRX746059 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 840 754 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634289 SRS732649 SRP049369 GSM1533536 suvr2 Inflorescence tissue containing young flowers_suvr2 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145834 GEO SRX746060 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 848 750 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634290 SRS732650 SRP049369 GSM1533537 suvr2 Inflorescence tissue containing young flowers_suvr2 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145844 GEO SRX746061 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 1128 1006 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634291 SRS732651 SRP049369 GSM1533538 suvr2 Inflorescence tissue containing young flowers_suvr2 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145841 GEO SRX746062 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 1164 1031 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634292 SRS732652 SRP049369 GSM1533539 drm1/2 Inflorescence tissue containing young flowers_drm1/2 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145843 GEO SRX746063 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 1122 1015 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634293 SRS732653 SRP049369 GSM1533540 drm1/2 Inflorescence tissue containing young flowers_drm1/2 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145840 GEO SRX746064 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 1092 972 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634294 SRS732654 SRP049369 GSM1533541 drm1/2 Inflorescence tissue containing young flowers_drm1/2 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145835 GEO SRX746065 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 1209 1117 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634295 SRS732655 SRP049369 GSM1533542 dcl3 Inflorescence tissue containing young flowers_dcl3 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145839 GEO SRX746066 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 990 896 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634296 SRS732656 SRP049369 GSM1533543 dcl3 Inflorescence tissue containing young flowers_dcl3 inflorescence public 0 ncRNA-Seq 51 PRJNA265184 SAMN03145837 GEO SRX746067 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-10-29 1091 1027 Arabidopsis thaliana ILLUMINA 2014-11-25 SRR1634297 SRS732657 SRP049369 GSM1533544 dcl3 Inflorescence tissue containing young flowers_dcl3 inflorescence public 0 ncRNA-Seq 80 PRJNA269310 SAMN03253038 GEO SRX796472 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-12-04 489 277 Arabidopsis thaliana ILLUMINA 2017-02-23 SRR1693713 SRS779849 SRP050570 GSM1558871 wild type pollen pollen public 0 ncRNA-Seq 80 PRJNA269310 SAMN03253045 GEO SRX796473 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-12-04 468 297 Arabidopsis thaliana ILLUMINA 2017-02-23 SRR1693714 SRS779850 SRP050570 GSM1558872 wild type unopened flower buds unopened flower buds public 0 ncRNA-Seq 100 PRJNA269310 SAMN03253044 GEO SRX796474 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-12-04 1638 1086 Arabidopsis thaliana ILLUMINA 2017-02-23 SRR1693715 SRS779851 SRP050570 GSM1558873 wild type unopened flower buds unopened flower buds public 0 ncRNA-Seq 100 PRJNA269310 SAMN03253046 GEO SRX796475 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-12-04 1324 874 Arabidopsis thaliana ILLUMINA 2017-02-23 SRR1693716 SRS779852 SRP050570 GSM1558874 wild type unopened flower buds unopened flower buds public 0 ncRNA-Seq 100 PRJNA269310 SAMN03253039 GEO SRX796476 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-12-04 453 300 Arabidopsis thaliana ILLUMINA 2017-02-23 SRR1693717 SRS779853 SRP050570 GSM1558875 ddm1 unopened flower buds unopened flower buds public 0 ncRNA-Seq 100 PRJNA269310 SAMN03253040 GEO SRX796477 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-12-04 1241 820 Arabidopsis thaliana ILLUMINA 2017-02-23 SRR1693718 SRS779854 SRP050570 GSM1558876 ddm1 unopened flower buds unopened flower buds public 0 ncRNA-Seq 100 PRJNA269310 SAMN03253042 GEO SRX796478 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-12-04 900 606 Arabidopsis thaliana ILLUMINA 2017-02-23 SRR1693719 SRS779855 SRP050570 GSM1558877 wild type pollen pollen public 0 ncRNA-Seq 100 PRJNA269310 SAMN03253043 GEO SRX796479 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2014-12-04 748 505 Arabidopsis thaliana ILLUMINA 2017-02-23 SRR1693720 SRS779856 SRP050570 GSM1558878 ago1 pollen pollen public 0 ncRNA-Seq 101 PRJNA272807 SAMN03287140 GEO SRX846856 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-01-16 1368 844 Arabidopsis thaliana ILLUMINA 2015-01-21 SRR1764563 SRS822421 SRP052548 GSM1586487 12-day-old wild type aerial portions public 0 ncRNA-Seq 101 PRJNA272807 SAMN03287137 GEO SRX846857 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-01-16 889 553 Arabidopsis thaliana ILLUMINA 2015-01-21 SRR1764564 SRS822422 SRP052548 GSM1586488 12-day-old wild type aerial portions public 0 ncRNA-Seq 101 PRJNA272807 SAMN03287138 GEO SRX846858 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-01-16 1518 929 Arabidopsis thaliana ILLUMINA 2015-01-21 SRR1764565 SRS822423 SRP052548 GSM1586489 12-day-old dcp2 mutant aerial portions public 0 ncRNA-Seq 101 PRJNA272807 SAMN03287135 GEO SRX846859 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-01-16 1727 1070 Arabidopsis thaliana ILLUMINA 2015-01-21 SRR1764566 SRS822424 SRP052548 GSM1586490 12-day-old dcp2 mutant aerial portions public 0 ncRNA-Seq 101 PRJNA272807 SAMN03287142 GEO SRX846860 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-01-16 1292 799 Arabidopsis thaliana ILLUMINA 2015-01-21 SRR1764567 SRS822425 SRP052548 GSM1586491 12-day-old vcs-6 mutant aerial portions public 0 ncRNA-Seq 101 PRJNA272807 SAMN03287139 GEO SRX846861 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-01-16 2411 1479 Arabidopsis thaliana ILLUMINA 2015-01-21 SRR1764568 SRS822426 SRP052548 GSM1586492 12-day-old vcs-6 mutant aerial portions public 0 ncRNA-Seq 101 PRJNA272807 SAMN03287136 GEO SRX846862 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-01-16 1641 1012 Arabidopsis thaliana ILLUMINA 2015-01-21 SRR1764569 SRS822427 SRP052548 GSM1586493 12-day-old dcp2 and rdr6 double mutant aerial portions public 0 ncRNA-Seq 101 PRJNA272807 SAMN03287141 GEO SRX846863 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-01-16 1611 973 Arabidopsis thaliana ILLUMINA 2015-01-21 SRR1764570 SRS822428 SRP052548 GSM1586494 12-day-old dcp2 and rdr6 double mutant aerial portions public 0 ncRNA-Seq 101 PRJNA272807 SAMN03287143 GEO SRX846864 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-01-16 1807 1113 Arabidopsis thaliana ILLUMINA 2015-01-21 SRR1764571 SRS822429 SRP052548 GSM1586495 12-day-old vcs-6 and rdr6 double mutant aerial portions public 0 ncRNA-Seq 101 PRJNA272807 SAMN03287144 GEO SRX846865 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-01-16 1520 933 Arabidopsis thaliana ILLUMINA 2015-01-21 SRR1764572 SRS822430 SRP052548 GSM1586496 12-day-old vcs-6 and rdr6 double mutant aerial portions public 0 ncRNA-Seq 50 PRJNA276134 SAMN03366753 GEO SRX886413 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-02-23 1109 723 Arabidopsis thaliana ILLUMINA 2015-11-02 SRR1814037 SRS853319 SRP055443 GSM1617428 Arabidopsis immature inflorescence immature inflorescence public 0 ncRNA-Seq 50 PRJNA276134 SAMN03366751 GEO SRX886412 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-02-23 756 498 Arabidopsis thaliana ILLUMINA 2015-11-02 SRR1814036 SRS853321 SRP055443 GSM1617427 Arabidopsis immature inflorescence immature inflorescence public 0 miRNA-Seq 23 PRJNA276415 SAMN03372571 NATIONAL TAIWAN UNIVERSITY SRX891808 Illumina HiSeq 2000 SINGLE size fractionation OTHER Col-0 flower 2015-02-26 120 85 Arabidopsis thaliana ILLUMINA 2015-08-23 SRR1818286 SRS857114 SRP055491 PHYL1/SAP54 sRNA Col-0 flower public 0 miRNA-Seq 22 PRJNA276415 SAMN03372571 NATIONAL TAIWAN UNIVERSITY SRX891807 Illumina HiSeq 2000 SINGLE size fractionation OTHER Col-0 flower 2015-02-26 114 84 Arabidopsis thaliana ILLUMINA 2015-08-23 SRR1818289 SRS857114 SRP055491 PHYL1/SAP54 sRNA Col-0 flower public 0 miRNA-Seq 21 PRJNA276415 SAMN03372571 NATIONAL TAIWAN UNIVERSITY SRX890300 Illumina HiSeq 2000 SINGLE size fractionation OTHER Col-0 flower 2015-02-25 236 191 Arabidopsis thaliana ILLUMINA 2015-08-23 SRR1818303 SRS857114 SRP055491 PHYL1/SAP54 sRNA Col-0 flower public 0 miRNA-Seq 50 PRJNA276789 SAMN03381086 CHINA AGRICULTURAL UNIVERSITY SRX893869 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC RbN 2015-03-02 1247 854 Arabidopsis thaliana ILLUMINA 2016-03-02 SRR1822370 SRS859994 SRP055699 RbN 6-week-old Col3-gl1 35S:AtAMT1;1 transgenic root public 0 miRNA-Seq 50 PRJNA276789 SAMN03381087 CHINA AGRICULTURAL UNIVERSITY SRX893871 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC Rk4 2015-03-02 1553 1077 Arabidopsis thaliana ILLUMINA 2016-03-02 SRR1822372 SRS859996 SRP055699 Rk4 6-week-old Col3-gl1 root public 0 miRNA-Seq 50 PRJNA273411 SAMN03291730 DDPSC SRX903204 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 35S:AtMIR390a-OsL-Ch42 2015-03-05 1358 901 Arabidopsis thaliana ILLUMINA 2015-03-06 SRR1842772 SRS865634 SRP052754 Small RNA sequencing in Arabidopsis inflorescences Col-0 Inflorescences public 0 miRNA-Seq 50 PRJNA273411 SAMN03291730 DDPSC SRX903238 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 35S:AtMIR390a-OsL-Ft 2015-03-05 1759 1132 Arabidopsis thaliana ILLUMINA 2015-03-06 SRR1842774 SRS865634 SRP052754 Small RNA sequencing in Arabidopsis inflorescences Col-0 Inflorescences public 0 miRNA-Seq 50 PRJNA273411 SAMN03291730 DDPSC SRX903245 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 35S:AtMIR390a-OsL-Trich 2015-03-05 2752 2013 Arabidopsis thaliana ILLUMINA 2015-03-06 SRR1842775 SRS865634 SRP052754 Small RNA sequencing in Arabidopsis inflorescences Col-0 Inflorescences public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392489 GEO SRX905314 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 224 167 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848829 SRS866169 SRP055902 GSM1626075 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392484 GEO SRX905313 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 222 165 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848828 SRS866170 SRP055902 GSM1626074 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392490 GEO SRX905312 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 218 164 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848827 SRS866171 SRP055902 GSM1626073 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392511 GEO SRX905311 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 220 160 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848826 SRS866172 SRP055902 GSM1626072 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392496 GEO SRX905310 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 215 157 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848825 SRS866173 SRP055902 GSM1626071 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392483 GEO SRX905309 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 219 162 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848824 SRS866174 SRP055902 GSM1626070 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392513 GEO SRX905308 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 216 157 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848823 SRS866175 SRP055902 GSM1626069 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392516 GEO SRX905307 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 219 160 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848822 SRS866176 SRP055902 GSM1626068 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392503 GEO SRX905306 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 216 156 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848821 SRS866177 SRP055902 GSM1626067 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392486 GEO SRX905305 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 219 159 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848820 SRS866178 SRP055902 GSM1626066 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392495 GEO SRX905304 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 218 163 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848819 SRS866179 SRP055902 GSM1626065 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392506 GEO SRX905303 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 217 162 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848818 SRS866180 SRP055902 GSM1626064 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392504 GEO SRX905302 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 226 170 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848817 SRS866184 SRP055902 GSM1626063 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392488 GEO SRX905301 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 219 164 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848816 SRS866185 SRP055902 GSM1626062 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392512 GEO SRX905300 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 219 168 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848815 SRS866186 SRP055902 GSM1626061 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392498 GEO SRX905299 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 222 165 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848814 SRS866187 SRP055902 GSM1626060 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392510 GEO SRX905297 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 222 165 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848812 SRS866188 SRP055902 GSM1626058 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392482 GEO SRX905298 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 227 170 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848813 SRS866189 SRP055902 GSM1626059 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392494 GEO SRX905296 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 220 161 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848811 SRS866190 SRP055902 GSM1626057 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392485 GEO SRX905295 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 217 157 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848810 SRS866191 SRP055902 GSM1626056 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392480 GEO SRX905294 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 216 160 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848809 SRS866192 SRP055902 GSM1626055 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392479 GEO SRX905293 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 218 158 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848808 SRS866193 SRP055902 GSM1626054 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392481 GEO SRX905291 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 218 159 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848806 SRS866194 SRP055902 GSM1626052 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392478 GEO SRX905292 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 222 160 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848807 SRS866195 SRP055902 GSM1626053 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392514 GEO SRX905289 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 217 158 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848804 SRS866196 SRP055902 GSM1626050 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392501 GEO SRX905287 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 222 165 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848802 SRS866197 SRP055902 GSM1626048 Col-0, wt, 30 days old adult plants public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392493 GEO SRX905290 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 224 162 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848805 SRS866198 SRP055902 GSM1626051 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392497 GEO SRX905288 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 220 159 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848803 SRS866199 SRP055902 GSM1626049 Col-0, wt, 15 days old seedlings public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392507 GEO SRX905286 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 231 172 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848801 SRS866200 SRP055902 GSM1626047 Col-0, wt, 30 days old adult plants public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392500 GEO SRX905285 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 228 168 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848800 SRS866201 SRP055902 GSM1626046 Col-0, wt, 30 days old adult plants public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392499 GEO SRX905282 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 230 169 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848797 SRS866202 SRP055902 GSM1626043 Col-0, wt, 30 days old adult plants public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392487 GEO SRX905283 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 228 168 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848798 SRS866203 SRP055902 GSM1626044 Col-0, wt, 30 days old adult plants public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392515 GEO SRX905284 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 231 168 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848799 SRS866204 SRP055902 GSM1626045 Col-0, wt, 30 days old adult plants public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392509 GEO SRX905281 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 232 170 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848796 SRS866205 SRP055902 GSM1626042 Col-0, wt, 27 days old adult plants public 0 ncRNA-Seq 21 PRJNA277424 SAMN03392502 GEO SRX905278 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 213 154 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848793 SRS866206 SRP055902 GSM1626039 Col-0, wt, 27 days old adult plants public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392491 GEO SRX905279 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 235 172 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848794 SRS866207 SRP055902 GSM1626040 Col-0, wt, 27 days old adult plants public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392492 GEO SRX905280 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 225 164 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848795 SRS866208 SRP055902 GSM1626041 Col-0, wt, 27 days old adult plants public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392505 GEO SRX905277 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 229 169 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848792 SRS866209 SRP055902 GSM1626038 Col-0, wt, 27 days old adult plants public 0 ncRNA-Seq 22 PRJNA277424 SAMN03392508 GEO SRX905276 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-03-06 232 169 Arabidopsis thaliana ILLUMINA 2016-11-23 SRR1848791 SRS866210 SRP055902 GSM1626037 Col-0, wt, 27 days old adult plants public 0 ncRNA-Seq 51 PRJNA280472 SAMN03462524 GEO SRX980451 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-06 1701 1276 Arabidopsis thaliana ILLUMINA 2015-06-25 SRR1954910 SRS895301 SRP056903 GSM1652033 Col-0 miR2118c overexpression Arabidopsis leaves, miR2118c overexpression leaves public 0 ncRNA-Seq 51 PRJNA280472 SAMN03462525 GEO SRX980452 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-06 1619 1227 Arabidopsis thaliana ILLUMINA 2015-06-25 SRR1954911 SRS895302 SRP056903 GSM1652034 Col-0 miR2118c overexpression Arabidopsis leaves, miR2118c overexpression leaves public 0 ncRNA-Seq 51 PRJNA280472 SAMN03462523 GEO SRX980450 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-06 1452 1101 Arabidopsis thaliana ILLUMINA 2015-06-25 SRR1954909 SRS895303 SRP056903 GSM1652032 Col-0 miR2118b overexpression Arabidopsis leaves, miR2118b overexpression leaves public 0 ncRNA-Seq 51 PRJNA280472 SAMN03462522 GEO SRX980449 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-06 1229 925 Arabidopsis thaliana ILLUMINA 2015-06-25 SRR1954908 SRS895304 SRP056903 GSM1652031 Col-0 miR2118b overexpression Arabidopsis leaves, miR2118b overexpression leaves public 0 ncRNA-Seq 51 PRJNA280472 SAMN03462521 GEO SRX980448 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-06 1569 1184 Arabidopsis thaliana ILLUMINA 2015-06-25 SRR1954907 SRS895305 SRP056903 GSM1652030 Col-0 miR2118a overexpression Arabidopsis leaves, miR2118a overexpression leaves public 0 ncRNA-Seq 51 PRJNA280472 SAMN03462520 GEO SRX980447 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-06 1610 1220 Arabidopsis thaliana ILLUMINA 2015-06-25 SRR1954906 SRS895306 SRP056903 GSM1652029 Col-0 miR2118a overexpression Arabidopsis leaves, miR2118a overexpression leaves public 0 ncRNA-Seq 51 PRJNA280472 SAMN03462519 GEO SRX980446 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-06 1823 1317 Arabidopsis thaliana ILLUMINA 2015-06-25 SRR1954905 SRS895307 SRP056903 GSM1652028 Col-0 miR2109 overexpression Arabidopsis leaves, miR2109 overexpression leaves public 0 ncRNA-Seq 51 PRJNA280472 SAMN03462518 GEO SRX980445 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-06 1469 1052 Arabidopsis thaliana ILLUMINA 2015-06-25 SRR1954904 SRS895308 SRP056903 GSM1652027 Col-0 miR2109 overexpression Arabidopsis leaves, miR2109 overexpression leaves public 0 ncRNA-Seq 51 PRJNA280472 SAMN03462517 GEO SRX980444 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-06 1666 1181 Arabidopsis thaliana ILLUMINA 2015-06-25 SRR1954903 SRS895309 SRP056903 GSM1652026 Col-0 miR1507 overexpression Arabidopsis leaves, miR1507 overexpression leaves public 0 ncRNA-Seq 51 PRJNA280472 SAMN03462516 GEO SRX980443 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-06 1539 1109 Arabidopsis thaliana ILLUMINA 2015-06-25 SRR1954902 SRS895310 SRP056903 GSM1652025 Col-0 miR1507 overexpression Arabidopsis leaves, miR1507 overexpression leaves public 0 ncRNA-Seq 51 PRJNA280472 SAMN03462515 GEO SRX980442 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-06 1419 1023 Arabidopsis thaliana ILLUMINA 2015-06-25 SRR1954901 SRS895311 SRP056903 GSM1652024 Col-0 empty vector Arabidopsis leaves, miRNA overexpression control leaves public 0 ncRNA-Seq 51 PRJNA280472 SAMN03462514 GEO SRX980441 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-06 1212 875 Arabidopsis thaliana ILLUMINA 2015-06-25 SRR1954900 SRS895312 SRP056903 GSM1652023 Col-0 empty vector Arabidopsis leaves, miRNA overexpression control leaves public 0 miRNA-Seq 50 PRJNA281937 SAMN03497819 GEO SRX1004261 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-22 921 625 Arabidopsis thaliana ILLUMINA 2016-03-24 SRR1986039 SRS919980 SRP057559 GSM1664665 wild type WT_miR173site-trGFP_pollen mature pollen public 0 miRNA-Seq 50 PRJNA281937 SAMN03497820 GEO SRX1004262 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-22 289 194 Arabidopsis thaliana ILLUMINA 2016-03-24 SRR1986040 SRS919981 SRP057559 GSM1664666 dcl2/dcl4 mutant mutant_miR173site-trGFP_pollen mature pollen public 0 miRNA-Seq 50 PRJNA281937 SAMN03497818 GEO SRX1004260 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-22 691 460 Arabidopsis thaliana ILLUMINA 2016-03-24 SRR1986038 SRS919982 SRP057559 GSM1664664 dcl2/dcl4 mutant mutant_22nt_mock_site-trGFP_pollen mature pollen public 0 miRNA-Seq 50 PRJNA281937 SAMN03497817 GEO SRX1004259 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-22 902 611 Arabidopsis thaliana ILLUMINA 2016-03-24 SRR1986037 SRS919983 SRP057559 GSM1664663 wild type WT_22nt_mock_site-trGFP_pollen mature pollen public 0 ncRNA-Seq 51 PRJNA261075 SAMN03570595 GEO SRX1012528 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 626 521 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000603 SRS924297 SRP047143 GSM1668910 Columbia dcl2/3/4 flowers_28_sRNA_dcl2/3/4_#2 immature inflorescence public 0 ncRNA-Seq 51 PRJNA261075 SAMN03570594 GEO SRX1012527 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 626 532 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000602 SRS924298 SRP047143 GSM1668909 Columbia dcl3/4 flowers_27_sRNA_dcl3/4 immature inflorescence public 0 ncRNA-Seq 51 PRJNA261075 SAMN03570593 GEO SRX1012526 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 822 681 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000601 SRS924299 SRP047143 GSM1668908 Columbia dcl2/3 flowers_26_sRNA_dcl2/3 immature inflorescence public 0 ncRNA-Seq 51 PRJNA261075 SAMN03570577 GEO SRX1012525 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 1668 1399 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000600 SRS924300 SRP047143 GSM1668907 Columbia dcl3 flowers_25_sRNA_dcl3 immature inflorescence public 0 ncRNA-Seq 51 PRJNA261075 SAMN03570576 GEO SRX1012524 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 681 572 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000599 SRS924301 SRP047143 GSM1668906 Columbia dcl2/4 flowers_24_sRNA_dcl2/4 immature inflorescence public 0 ncRNA-Seq 50 PRJNA261075 SAMN03570575 GEO SRX1012523 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 1386 1429 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000598 SRS924303 SRP047143 GSM1668905 Columbia wildtype flowers_23_sRNA_Col_#3 immature inflorescence public 0 ncRNA-Seq 51 PRJNA261075 SAMN03570574 GEO SRX1012522 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 1148 1234 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000597 SRS924304 SRP047143 GSM1668904 Columbia dcl3/rdr2 flowers_22_sRNA_dcl3/rdr2 immature inflorescence public 0 ncRNA-Seq 51 PRJNA261075 SAMN03570573 GEO SRX1012521 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 946 1020 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000596 SRS924305 SRP047143 GSM1668903 Columbia dcl3/nrpd1 flowers_21_sRNA_dcl3/nrpd1 immature inflorescence public 0 ncRNA-Seq 50 PRJNA261075 SAMN03570572 GEO SRX1012520 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 1063 984 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000595 SRS924306 SRP047143 GSM1668902 Columbia rdr2 flowers_20_sRNA_rdr2 immature inflorescence public 0 ncRNA-Seq 50 PRJNA261075 SAMN03570571 GEO SRX1012519 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 716 660 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000594 SRS924307 SRP047143 GSM1668901 Columbia nrp(d/e)2 flowers_19_sRNA_nrp(d/e)2 immature inflorescence public 0 ncRNA-Seq 50 PRJNA261075 SAMN03570570 GEO SRX1012518 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 917 835 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000593 SRS924308 SRP047143 GSM1668900 Columbia nrpd1 flowers_18_sRNA_nrpd1 immature inflorescence public 0 ncRNA-Seq 51 PRJNA261075 SAMN03570569 GEO SRX1012517 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 2066 1781 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000592 SRS924309 SRP047143 GSM1668899 Columbia wildtype flowers_17_sRNA_Col_#2 immature inflorescence public 0 ncRNA-Seq 50 PRJNA261075 SAMN03570568 GEO SRX1012516 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 761 701 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000591 SRS924310 SRP047143 GSM1668898 Columbia dcl2/3/4 flowers_16_sRNA_dcl2/3/4_#1 immature inflorescence public 0 ncRNA-Seq 50 PRJNA261075 SAMN03570592 GEO SRX1012515 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 797 725 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000590 SRS924311 SRP047143 GSM1668897 Columbia wildtype flowers_15_sRNA_Col_#1 immature inflorescence public 0 ncRNA-Seq 100 PRJNA261075 SAMN03570591 GEO SRX1012514 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 2428 2097 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000589 SRS924312 SRP047143 GSM1668896 Columbia dcl2/3/4 flowers_14_PATH_dcl2/3/4_#2 immature inflorescence public 0 ncRNA-Seq 100 PRJNA261075 SAMN03570590 GEO SRX1012513 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 2553 2207 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000588 SRS924313 SRP047143 GSM1668895 Columbia dcl3/4 flowers_13_PATH_dcl3/4 immature inflorescence public 0 ncRNA-Seq 100 PRJNA261075 SAMN03570589 GEO SRX1012512 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 2223 1900 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000587 SRS924314 SRP047143 GSM1668894 Columbia dcl2/3 flowers_12_PATH_dcl2/3 immature inflorescence public 0 ncRNA-Seq 100 PRJNA261075 SAMN03570588 GEO SRX1012511 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 2174 1882 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000586 SRS924315 SRP047143 GSM1668893 Columbia dcl3 flowers_11_PATH_dcl3 immature inflorescence public 0 ncRNA-Seq 100 PRJNA261075 SAMN03570587 GEO SRX1012510 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 2264 1945 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000585 SRS924316 SRP047143 GSM1668892 Columbia dcl2/4 flowers_10_PATH_dcl2/4 immature inflorescence public 0 ncRNA-Seq 100 PRJNA261075 SAMN03570586 GEO SRX1012509 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 2679 2315 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000584 SRS924317 SRP047143 GSM1668891 Columbia wildtype flowers_9_PATH_Col_#3 immature inflorescence public 0 ncRNA-Seq 100 PRJNA261075 SAMN03570585 GEO SRX1012508 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 5947 4831 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000583 SRS924318 SRP047143 GSM1668890 Columbia dcl3/rdr2 flowers_8_PATH_dcl3/rdr2 immature inflorescence public 0 ncRNA-Seq 100 PRJNA261075 SAMN03570584 GEO SRX1012507 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 5180 4214 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000582 SRS924319 SRP047143 GSM1668889 Columbia dcl3/nrpd1 flowers_7_PATH_dcl3/nrpd1 immature inflorescence public 0 ncRNA-Seq 100 PRJNA261075 SAMN03570583 GEO SRX1012506 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 6824 5658 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000581 SRS924320 SRP047143 GSM1668888 Columbia rdr2 flowers_6_PATH_rdr2 immature inflorescence public 0 ncRNA-Seq 100 PRJNA261075 SAMN03570582 GEO SRX1012505 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 6417 5319 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000580 SRS924321 SRP047143 GSM1668887 Columbia nrp(d/e)2 flowers_5_PATH_nrp(d/e)2 immature inflorescence public 0 ncRNA-Seq 100 PRJNA261075 SAMN03570581 GEO SRX1012504 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 5810 4794 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000579 SRS924322 SRP047143 GSM1668886 Columbia nrpd1 flowers_4_PATH_nrpd1 immature inflorescence public 0 ncRNA-Seq 100 PRJNA261075 SAMN03570580 GEO SRX1012503 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 7832 6491 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000578 SRS924323 SRP047143 GSM1668885 Columbia wildtype flowers_3_PATH_Col_#2 immature inflorescence public 0 ncRNA-Seq 120 PRJNA261075 SAMN03570579 GEO SRX1012502 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 10317 8774 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000577 SRS924324 SRP047143 GSM1668884 Columbia dcl2/3/4 flowers_2_PATH_dcl2/3/4_#1 immature inflorescence public 0 ncRNA-Seq 120 PRJNA261075 SAMN03570578 GEO SRX1012501 Illumina HiSeq 2500 SINGLE size fractionation TRANSCRIPTOMIC 2015-04-28 18583 16098 Arabidopsis thaliana ILLUMINA 2015-09-14 SRR2000576 SRS924325 SRP047143 GSM1668883 Columbia wildtype flowers_1_PATH_Col_#1 immature inflorescence public 0 ncRNA-Seq 49 PRJNA284104 SAMN03658572 GEO SRX1029294 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-05-15 446 319 Arabidopsis thaliana ILLUMINA 2017-02-14 SRR2027873 SRS938313 SRP058374 GSM1684707 22-day-old Columbia DCL1 mutnat seedling public 0 ncRNA-Seq 49 PRJNA284104 SAMN03658571 GEO SRX1029293 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-05-15 687 457 Arabidopsis thaliana ILLUMINA 2017-02-14 SRR2027872 SRS938314 SRP058374 GSM1684706 22-day-old Columbia CDF2 mutant seedling public 0 ncRNA-Seq 49 PRJNA284104 SAMN03658570 GEO SRX1029292 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-05-15 677 447 Arabidopsis thaliana ILLUMINA 2017-02-14 SRR2027871 SRS938315 SRP058374 GSM1684705 22-day-old Columbia WT seedling public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798085 GEO SRX1074562 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 783 462 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079812 SRS973176 SRP018034 GSM1723756 Arabidopsis leaf leaf public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798084 GEO SRX1074561 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 763 467 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079811 SRS973179 SRP018034 GSM1723755 Arabidopsis leaf leaf public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798083 GEO SRX1074560 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 685 408 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079810 SRS973180 SRP018034 GSM1723754 Arabidopsis leaf leaf public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798081 GEO SRX1074558 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 863 525 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079808 SRS973181 SRP018034 GSM1723752 Arabidopsis leaf leaf public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798082 GEO SRX1074559 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 877 528 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079809 SRS973182 SRP018034 GSM1723753 Arabidopsis leaf leaf public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798080 GEO SRX1074557 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 795 467 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079807 SRS973183 SRP018034 GSM1723751 Arabidopsis leaf leaf public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798078 GEO SRX1074555 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 1025 614 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079805 SRS973184 SRP018034 GSM1723749 Arabidopsis leaf leaf public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798079 GEO SRX1074556 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 931 557 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079806 SRS973185 SRP018034 GSM1723750 Arabidopsis leaf leaf public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798077 GEO SRX1074554 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 755 444 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079804 SRS973186 SRP018034 GSM1723748 Arabidopsis leaf leaf public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798076 GEO SRX1074553 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 848 507 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079803 SRS973187 SRP018034 GSM1723747 Arabidopsis leaf leaf public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798075 GEO SRX1074552 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 1043 634 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079802 SRS973188 SRP018034 GSM1723746 Arabidopsis leaf leaf public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798074 GEO SRX1074551 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 608 355 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079801 SRS973189 SRP018034 GSM1723745 Arabidopsis leaf leaf public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798073 GEO SRX1074550 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 821 488 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079800 SRS973190 SRP018034 GSM1723744 Arabidopsis leaf leaf public 0 ncRNA-Seq 51 PRJNA186843 SAMN03798072 GEO SRX1074549 Illumina HiSeq 2000 SINGLE size fractionation TRANSCRIPTOMIC 2015-06-26 859 499 Arabidopsis thaliana ILLUMINA 2016-03-16 SRR2079799 SRS973191 SRP018034 GSM1723743 Arabidopsis leaf leaf public 0 miRNA-Seq 50 PRJNA289017 SAMN03840744 GEO SRX1081865 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-07-06 174 113 Arabidopsis thaliana ILLUMINA 2015-09-08 SRR2087892 SRS979595 SRP060393 GSM1810036 RKD2 callus public 0 miRNA-Seq 50 PRJNA289017 SAMN03840743 GEO SRX1081864 Illumina HiSeq 1000 SINGLE size fractionation TRANSCRIPTOMIC 2015-07-06 141 95 Arabidopsis thaliana ILLUMINA 2015-09-08 SRR2087891 SRS979596 SRP060393 GSM1810033 RKD2 callus public 0 ncRNA-Seq 200 PRJNA289906 SAMN03859657 GEO SRX1097235 Illumina HiSeq 2000 PAIRED size fractionation TRANSCRIPTOMIC 2015-07-14 1166 765 Arabidopsis thaliana ILLUMINA 2016-03-18 SRR2102654 SRS992515 SRP061168 GSM1821793 dcl1234 mutant seedling seedling public 0 ncRNA-Seq 200 PRJNA289906 SAMN03859655 GEO SRX1097233 Illumina HiSeq 2000 PAIRED size fractionation TRANSCRIPTOMIC 2015-07-14 1294 848 Arabidopsis thaliana ILLUMINA 2016-03-18 SRR2102652 SRS992516 SRP061168 GSM1821791 WT seedling seedling public 0 ncRNA-Seq 200 PRJNA289906 SAMN03859656 GEO SRX1097234 Illumina HiSeq 2000 PAIRED size fractionation TRANSCRIPTOMIC 2015-07-14 1246 818 Arabidopsis thaliana ILLUMINA 2016-03-18 SRR2102653 SRS992517 SRP061168 GSM1821792 dcl234 mutant seedling seedling public 0