GENERAL INFORMATION

1. Title of Dataset: Data from: Aedes albopictus host odor preference does not drive observed variation in feeding patterns across field populations

2. Authors: Kara Fikrig1*, Noah Rose2, Nathan Burkett-Cadena3, Basile Kamgang4, Paul Leisnham5, Jamie Mangan1, Alongkot Ponlawat6, Sarah Rothman5, Tanise Stenn3, Carolyn S. McBride2, Laura C. Harrington1
1Cornell University, Ithaca, NY, United States,Ê2Princeton University, Princeton, NJ, United States,Ê3University of Florida, Vero Beach, FL, United States,Ê4Centre for Research in Infectious Disease, YaoundŽ, Cameroon,Ê5University of Maryland, College Park, MD, United States,Ê6Armed Forces Research Institute of Medical Sciences (AFRIMS), Bangkok, Thailand

Contact information: 
Name: Kara Fikrig 
Institution: Entomology Department 
Cornell University, Ithaca, New York. 
Email: kmf227@cornell.edu 
ORCID: https://orcid.org/0000-0002-5850-9948

3. Date of collection: Mosquitoes collected in 2021 and reared in colony 2021-2022.

4. Geographic Location: Collections were conducted in: New York, Maryland, Virginia, Florida, Thailand and Cameroon. Rearing took place in Ithaca, New York, and Princeton, New Jersey. Preference assays were conducted in Princeton, NJ.

5. Funding: This work was supported in part through Cooperative Agreement U01CK000509 between the Centers for Disease Control and Prevention (CDC) and Cornell University/Northeast Regional Center for Excellence in Vector-Borne Diseases.

6. Methodological information: Field and laboratory methods used for data collection are described in the paper ÒAedes albopictus host odor preference does not drive observed variation in feeding patterns across field populations?Ó in revision by Scientific Reports (2022) and published as a preprint on research square (https://doi.org/10.21203/rs.3.rs-2018162/v1).

The participation of humans in olfactometer trials using these methods was approved and monitored by the Princeton University Institutional Review Board (protocol 8170). The use of guinea pigs in olfactometer trials was approved and monitored by the Princeton University Institutional Animal Care and Use Committee (protocol 1998-20)

SHARING/ACCESS INFORMATION

1. License: CC-BY. Authors are welcome to use the data if they cite the original publication for which this data was collected (preprint: https://doi.org/10.21203/rs.3.rs-2018162/v1 and eventually, the peer-reviewed version), and the dataset.

2. Links to publications that cite or use the data: 
https://doi.org/10.21203/rs.3.rs-2018162/v1


DATA & FILE OVERVIEW

1. File List: 
princeton_1_preference_datasheet_forpub.csv
princeton_2_preference_datasheet.csv
arm_type_preference_datasheet.csv
emmeans_output_princeton_1_forpub.csv
emmeans_output_princeton_2_forpub.csv
emmeans_output_princeton_comb_forpub.csv
emmeans_output_armtype.csv
Albo Preference For Pub.Rmd



DATA-SPECIFIC INFORMATION FOR: princeton_1_preference_datasheet_forpub.csv

1. Short description: This dataset includes data about each preference trial for the first experimental round.

2. Number of variables
Rows: 52
Columns: 13

3. Variable list:

trial: unique ID for each trial conducted within the first experimental round. Trials with numbers were conducted as part of the experiment and trials with letters were conducted as pilots or participant recruitment.

date: the date that the trial was conducted

colony: the colony ID. Pos control is the Cornell anthropophilic Ae. aegypti, t51 is the Princeton anthropophilic Ae. aegypti, Uganda is the zoophilic Ae. aegypti, cam, is Cameroon 1, thai albo, is Thailand 1, li is New York, va is Virginia, fl is Florida, and balt is Maryland 1. 

total_released: the number of mosquitoes released at the beginning of a trial

n_human: the number of mosquitoes that were in the human-baited port at the end of the trial

n_guinea: the number of mosquitoes that were in the guinea pig-baited port at the end of the trial

n_nochoice: the number of mosquitoes that did not enter a port

n_dead: the number of mosquitoes that were dead at the end of the trial

start_Ce: the time the trial was started

human_side: the port side that the human was presented on

human: the human subject participating in the trial

gp_id: the guinea pig subject participating in the trial

Notes: notes on the trial, e.g. if the guinea pig pooped/peed, wind speed (meters/second), etc.



DATA-SPECIFIC INFORMATION FOR: princeton_2_preference_datasheet_forpub.csv

1. Short description: This dataset includes data about each preference trial for the second experimental round.

2. Number of variables
Rows: 52
Columns: 12

3. Variable list:

trial: unique ID for each trial conducted within the second experimental round.

date: the date that the trial was conducted

colony: the colony ID. Pos control is the Cornell anthropophilic Ae. aegypti, t51 princeton is the Princeton anthropophilic Ae. aegypti reared at Princeton, t51 cornell is the Princeton anthropophilic Ae. aegypti reared at Cornell (Transport Control), uganda is the zoophilic Ae. aegypti, cam sub is Cameroon 1,  cam dt is Cameroon 2, thai cb is Thailand 1, thai ray is Thailand 2, li is New York, va is Virginia, fl is Florida, balt hh is Maryland 1, and balt bh is Maryland 2. 

total_released: the number of mosquitoes released at the beginning of a trial

n_human: the number of mosquitoes that were in the human-baited port at the end of the trial

n_guinea: the number of mosquitoes that were in the guinea pig-baited port at the end of the trial

n_dead: the number of mosquitoes that were dead at the end of the trial

start_time: the time the trial was started

end_time: the time the trial was ended

human_side: the port side that the human was presented on

gp_id: the guinea pig subject participating in the trial

Notes: notes on the trial, e.g. if the guinea pig pooped/peed, etc.


DATA-SPECIFIC INFORMATION FOR: arm_type_preference_datasheet.csv

1. Short description: This dataset includes data from the trials comparing arm presentation method

2. Number of variables
Rows: 12
Columns: 14

3. Variable list:

trial: unique ID for each trial conducted within the arm presentation comparison experiment

colony: the colony ID. t51 Cornell is the Princeton anthropophilic Ae. aegypti reared at Cornell, Uganda is the zoophilic Ae. aegypti

total_released: the number of mosquitoes released at the beginning of a trial

date: the date the trials were conducted

n_human: the number of mosquitoes that were in the human-baited port at the end of the trial

n_guinea: the number of mosquitoes that were in the guinea pig-baited port at the end of the trial

n_nochoice: the number that did not make a choice (not recorded for these trials)

n_dead: the number of mosquitoes that were dead at the end of the trial

start_time: the time the trial was started

end_time: the time the trial was ended (only filled in once because all trials were exactly 10 min)

human_side: the port side that the human was presented on

gp_id: the guinea pig subject participating in the trial

arm_type: the form of arm presentation; full is the full forearm and crook is the elbow

group: the combination of colony and arm_type



DATA-SPECIFIC INFORMATION FOR: emmeans_output_princeton_1_forpub.csv

1. Short description: This dataset includes the output from the first round glmmTMB model emmeans post hoc analysis.

2. Number of variables
Rows: 9
Columns: 5

3. Variable list:

colony: the colony ID

prob: the predicted probability output from glmmTMB emmeans post hoc analysis.

lower CL: the lower confidence limit output from glmmTMB emmeans post hoc analysis.

upper_CL: the upper confidence limit output from glmmTMB emmeans post hoc analysis.

phagy: the feeding behavior category; low are Ae. albopictus colonies previously reported as having low levels of anthropophagy, high are Ae. albopictus colonies previously reported as having high levels of anthropophagy, control are Ae. aegypti colonies with assumed (CU anthro. Ae. aegypti) or previously characterized (Zoophilic Ae. aegypti and PU anthro. Ae. aegypti) host preference.

DATA-SPECIFIC INFORMATION FOR: emmeans_output_princeton_2_forpub.csv

1. Short description: This dataset includes the output from the second round glmmTMB model emmeans post hoc analysis.

2. Number of variables
Rows: 13
Columns: 5

3. Variable list:

colony: the colony ID

prob: the predicted probability output from glmmTMB emmeans post hoc analysis.

lower CL: the lower confidence limit output from glmmTMB emmeans post hoc analysis.

upper_CL: the upper confidence limit output from glmmTMB emmeans post hoc analysis.

phagy: the feeding behavior category; low are Ae. albopictus colonies previously reported as having low levels of anthropophagy, high are Ae. albopictus colonies previously reported as having high levels of anthropophagy, control are Ae. aegypti colonies with assumed (CU anthro. Ae. aegypti) or previously characterized (Zoophilic Ae. aegypti and PU anthro. Ae. aegypti, Transport Control) host preference.


DATA-SPECIFIC INFORMATION FOR: emmeans_output_princeton_comb_forpub.csv

1. Short description: This dataset includes the output from the combined glmmTMB model emmeans post hoc analysis.

2. Number of variables
Rows: 9
Columns: 5

3. Variable list:

colony: the colony ID

prob: the predicted probability output from glmmTMB emmeans post hoc analysis.

lower CL: the lower confidence limit output from glmmTMB emmeans post hoc analysis.

upper_CL: the upper confidence limit output from glmmTMB emmeans post hoc analysis.

phagy: the feeding behavior category; low are Ae. albopictus colonies previously reported as having low levels of anthropophagy, high are Ae. albopictus colonies previously reported as having high levels of anthropophagy, control are Ae. aegypti colonies with assumed (CU anthro. Ae. aegypti) or previously characterized (Zoophilic Ae. aegypti and PU anthro. Ae. aegypti) host preference.


DATA-SPECIFIC INFORMATION FOR: emmeans_output_armtype.csv

1. Short description: This dataset includes the output from the arm type comparison glmmTMB model emmeans post hoc analysis.

2. Number of variables
Rows: 4
Columns: 5

3. Variable list:

colony: the colony ID

prob: the predicted probability output from glmmTMB emmeans post hoc analysis.

lower CL: the lower confidence limit output from glmmTMB emmeans post hoc analysis.

upper_CL: the upper confidence limit output from glmmTMB emmeans post hoc analysis.

arm type: the form of arm presentation (Elbow or Forearm)



DATA-SPECIFIC INFORMATION FOR: Albo Preference For Pub.Rmd

This file is an R Markdown file with the code used to analyze the data for results published in associated paper: https://doi.org/10.21203/rs.3.rs-2018162/v1